Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
大阪大学的EMPIAR-PDBj团队为亚洲EM研究人员向EMPIAR传送大型EM图像数据提供服务。 除了通过互联网将数据直接传送到EBI(UK),研究人员还可以通过邮政或快递服务将数据硬盘发送到大阪大学,或者通过互联网传送到设置于大阪大学的服务器,然后由我们代为传送至数据登录网站。 如果您想使用此项服务,请先通过 电子邮件 与我们联系。
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-05-03 | In situ single particle classification reveals distinct 60S maturation intermediates in cells [multiple data sets in MRC format] | Lucas BA, Zhang K, Loerch S, Grigorieff N [DOI: 10.1101/2022.04.10.487797] |
10.5 GB | — | |
| 2023-01-03 | Movies of apoferritin collected at different dose rates on the Direct Electron Apollo direct detector - 15 eps [972 multi-frame micrographs composed of 76 frames each in TIFF format] | Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM [Pubmed: 36578473] [DOI: 10.1016/j.yjsbx.2022.100080] |
297.2 GB | — | |
| 2025-10-28 | Structural Insights into De Novo Promoter Escape by Mycobacterium tuberculosis RNA Polymerase [10979 multi-frame micrographs composed of 50 frames each in TIFF format] | Brewer JJ, Campbell EA, Darst SA, Delbeau M, Bates Zoullas W | 3.0 TB | — | |
| 2026-03-12 | cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 6 [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
47.9 GB | — | |
| 2019-06-07 | Scanning electron diffraction data collected from peptide microcrystals [30000 micrographs in DM4 format] | Gallagher-Jones M, Rodriguez JA, Bustillo K, Ophus C [Pubmed: 30675524] [DOI: 10.1038/s42003-018-0263-8] |
144.3 GB | — | |
| 2025-03-20 | Efficient cell-wide mapping of mitochondria in electron microscopic volumes using webKnossos [multiple data sets in TIFF format] | Jiang Y, Wang H, Boergens K, Rzepka N, Wang F, Hua Y [DOI: 10.1016/j.crmeth.2025.100989] |
996.4 GB | — | |
| 2026-03-12 | cryo electron tomography of mouse hippocampal CA1-py dataset [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
175.8 GB | — | |
| 2025-03-19 | Dataset of apoferritin on HexAuFoil grids [multiple data sets in TIFF format] | Weckener M, Naylor CE | 53.4 GB | — | |
| 2026-03-12 | cryo electron tomography of mouse cortex [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
168.9 GB | — | |
| 2024-07-04 | Tomograms and the raw 2d tilt series of ER-nuclear envelope junctions of HeLa cells in interphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
434.0 GB | — | |
| 2020-12-11 | Integrative imaging reveals SARS-CoV-2 induced reshaping of subcellular morphology [multiple data sets in MRC, BIG DATA VIEWER HDF5 and TIFF formats] | Cortese M, Lee JY, Cerikan B, Neufeldt CJ, Oorschot VMJ, Köhrer S, Hennies J, Schieber NL, Ronchi P, Mizzon G, Romero-Brey I, Santarella-Mellwig R, Schorb M, Boermel M, Mocaer K, Beckwith MS, Templin RM, Gross V, Pape C, Tischer C, Frankish J, Horvat NK, Laketa V, Stanifer M, Boulant S, Ruggieri A, Chatel-Chaix L, Schwab Y, Bartenschlager R [Pubmed: 33245857] [DOI: 10.1016/j.chom.2020.11.003] |
1.1 TB | — | |
| 2022-05-31 | FIB-SEM of U2OS cell at leading edge of a wound assay, LPA stimulated, polarized [1798 multi-frame micrographs composed of 1 frames each in TIFF format] | Costa J, Pinto A, Machado P | 4.1 GB | — | |
| 2022-05-31 | FIB-SEM of U2OS cell at leading edge of a wound assay, non-LPA stimulated, non-polarized [998 multi-frame micrographs composed of 1 frames each in TIFF format] | Costa J, Pinto A, Machado P | 5.7 GB | — | |
| 2025-09-25 | cryoCLEM-guided cryoET of adult brain Psd95-containing synapses ('ultra fresh' preparation and brain tissue cryo-section tomograms) [multiple data sets in MRC format] | Peukes J, Lovatt C, Leistner C, Boulanger J, Morado DR, Fuller MJG, Kukulski W, Zhu F, Komiyama NH, Briggs JAG, Grant SGN, Frank RAW [DOI: 10.7554/eLife.100335.1] |
442.9 GB | — | |
| 2019-04-18 | CryoET of cis-mutated mouse protocadherin gamma B6 on membranes [multiple data sets in MRC format] | Brasch J, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
379.7 GB | — | |
| 2023-01-18 | Movies of apoferritin collected at different dose rates on the Direct Electron Apollo direct detector - 30 eps [1478 multi-frame micrographs composed of 40 frames each in TIFF format] | Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM [Pubmed: 36578473] [DOI: 10.1016/j.yjsbx.2022.100080] |
348.5 GB | — | |
| 2025-07-01 | CryoEM dataset of Retron-Eco1 E106A filaments [7748 multi-frame micrographs composed of 40 frames each in MRC format] | Carabias A, Camara-Wilpert S, Mestre MR, Lopéz-Méndez B, Hendriks IA, Zhao R, Pape T, Fuglsang A, Luk SH, Nielsen ML, Pinilla-Redondo R, Montoya G [Pubmed: 38788717] [DOI: 10.1016/j.molcel.2024.05.001] |
4.7 TB | — | |
| 2019-04-18 | CryoET of mouse protocadherin gamma B6 on membranes (without energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
363.4 GB | — | |
| 2019-04-18 | CryoET of mouse protocadherin gamma B6 on membranes (with energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Carragher B [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
411.3 GB | — | |
| 2024-10-11 | CryoEM ice images and labels used for VirtualIce [multiple data sets in MRC, MRCS and JPEG formats] | Noble AJ [DOI: 10.1101/2024.09.28.615520] |
308.6 GB | — | |
| 2025-11-13 | Cryo-electron tomography of the MTEC transition zone [multiple data sets in MRC format] | McCafferty CL, van den Hoek H, Müller A, Van der Stappen P, Righetto RD, Stearns T, Engel BD [Pubmed: 41364719] [DOI: 10.1371/journal.pbio.3003519] |
1.1 TB | — |