Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some datasets are currently inaccessible or incomplete (marked as Incomplete dataset).
We are pleased to report that the following entries have been restored:
EMPIAR-10577 (New)We are still accepting requests for datasets you would like us to download first (email, inquiry).
We apologize for the inconvenience and appreciate your understanding.
EMPIAR-PDBj services will be suspended during the following period for a legally required inspection of electrical equipment.
During this period, the website and data downloads from EMPIAR-PDBj will be unavailable.
Please use EMPIAR-EBI instead.
We apologize for any inconvenience.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-07-01 |  |
Full body vEM stack of the 2-day-old Platynereis dumerilii larva [6400 multi-frame micrographs composed of 1 frames each in TIFF format] | Shahidi R | 37.1 TB | — |
| 2026-07-01 |  |
SBF-SEM analysis of atg18-mNG:loxP parasite architecture [multiple data sets in DM3 format] | Schmitz Y, Sengupta M, Schneider C, Ziesmann T, Hellmold F, Distler U, Reimer R, Matz JM [DOI: 10.64898/2026.04.14.718606] |
108.7 GB | — |
| 2026-10-09 |  |
Capped F-actin raw data from Mechanism of Actin Thin Filament Pointed-End Elongation by Leiomodin [multiple data sets in TIFF format] | Brotzman SB, Palmer NJ, Boczkowska M, Dominguez R [Pubmed: 42477379] [DOI: 10.1038/s41467-026-74810-6] |
29.4 TB | 2.06 - 4.06 Å |
| 2026-10-06 |  |
Cryo-EM structure of the hTUT4_mini:Lin28A:pre-let-7g_UUU complex [multiple data sets in TIFF format] | Han X, Yamashita S, Tomita K [Pubmed: 41521656] [DOI: 10.1093/nar/gkaf1421] |
7.7 TB | 3.78 - 3.82 Å |
| 2026-10-09 |  |
Cryo-EM structure of the Lhcp trimer from Ostreococcus tauri at 1.94 angstrom resolution [6144 multi-frame micrographs composed of 40 frames each in TIFF format] | Soichiro S, Kubota M, Ishii A, Kim E, Tomoko M, Hideaki T, Keiichi N, Genji K, Minagawa J, Ritsuko F [Pubmed: 41249568] [DOI: 10.1038/s42003-025-08977-x] |
3.5 TB | 1.94 Å |
| 2026-10-06 |  |
JMV449-NTSR1-Go nucleotide free [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
5.1 TB | 2.95 - 3.37 Å |
| 2026-10-02 |  |
JMV449-NTSR1-Gq nucleotide free [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
2.5 TB | 2.24 Å |
| 2026-10-16 |  |
JMV449-NTSR1-Gi in 8 seconds following the GDP addition [14217 multi-frame micrographs composed of 48 frames each in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
2.8 TB | 3.02 - 3.65 Å |
| 2026-08-04 |  |
JMV449-NTSR1-Gi in 15 seconds following the GDP addition [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
3.3 TB | 2.85 - 3.14 Å |
| 2026-10-06 |  |
JMV449-NTSR1-Gi in 0 to 5 seconds following the GTP addition. [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
4.0 TB | 2.4 - 3.1 Å |
| 2026-10-02 |  |
JMV449-NTSR1-Gi in 8 seconds following the GTP addition [12138 multi-frame micrographs composed of 48 frames each in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
2.7 TB | 3.01 - 3.38 Å |
| 2026-10-02 |  |
P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in LMNG detergent [multiple data sets in TIFF format] | Hamaguchi-Suzuki N, Adachi N, Moriya T, Yasuda S, Kawasaki M, Suzuki K, Ogasawara S, Anzai N, Senda T, Murata T [Pubmed: 38579618] [DOI: 10.1016/j.bbrc.2024.149855] |
2.1 TB | 2.49 - 2.54 Å |
| 2026-10-06 |  |
Cryo-EM structure of the inhibitor-bound Vo complex from Enterococcus hirae [4239 multi-frame micrographs composed of 49 frames each in TIFF format] | Suzuki K, Goto Y, Otomo A, Shimizu K, Abe S, Moriyama K, Yasuda S, Hashimoto Y, Kurushima J, Mikuriya S, Imai FL, Adachi N, Kawasaki M, Sato Y, Ogasawara S, Iwata S, Senda T, Ikeguchi M, Tomita H, Iino R, Moriya T, Murata T [Pubmed: 39572733] [DOI: 10.1038/s41594-024-01419-y] |
999.9 GB | 2.2 Å |
| 2026-10-06 |  |
Cryo-EM Structure of hERG Channel [multiple data sets in TIFF format] | Miyashita Y, Moriya T, Kato T, Kawasaki M, Yasuda S, Adachi N, Suzuki K, Ogasawara S, Saito T, Senda T, Murata T [Pubmed: 39321803] [DOI: 10.1016/j.str.2024.08.021] |
8.4 TB | 3.18 - 3.29 Å |
| 2026-07-14 |  |
Stomatin encapsulates aquaporin-1 and urea transporter-B in the erythrocyte membrane [multiple data sets in TIFF and MRC formats] | Vallese F, Clarke OB [Pubmed: 41921000] [DOI: 10.1126/sciadv.aec1721] |
3.6 TB | 2.0 Å |
| 2026-10-07 |  |
Rabbit ryanodine receptor type 1 complexed with FKBP12.6, calmodulin, ADP, 4-chloro-m-cresol, and caffeine [9130 multi-frame micrographs composed of 50 frames each in TIFF format] | Kim K, Clarke OB [DOI: 10.1038/s41467-026-76519-y] |
2.3 TB | 2.08 - 2.52 Å |
| 2026-10-07 |  |
Rabbit ryanodine receptor type 1 complexed with FKBP12.6, calmodulin, dantrolene, ATP, 4-chloro-m-cresol, and caffeine [5959 multi-frame micrographs composed of 40 frames each in TIFF format] | Kim K, Clarke OB [DOI: 10.1038/s41467-026-76519-y] |
1.1 TB | 2.49 - 3.09 Å |
| 2026-09-03 |  |
Cryo-electron tomography of functionally validated synapses in human induced neurons [multiple data sets in MRC format] | Sun RS | 164.1 GB | — |
| 2026-07-24 |  |
Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex [multiple data sets in TIFF and MRC formats] | Pelea O., Fernandez Carrera J., Gerecke S. E., Chanez C., Jinek M. [Pubmed: 41642947] [DOI: 10.1126/science.adz1884] |
1.2 TB | 2.81 Å |
| 2026-07-10 |  |
Cryo Electron Microscopy micrographs of multidrug resistance-associated protein 2 (MRP2) EQ Mutant bound to ATP [7532 multi-frame micrographs composed of 50 frames each in TIFF format] | Koide EK, Pietz HLP, Beltran JB, Chen JC [Pubmed: 39779684] [DOI: 10.1038/s41467-024-55810-w] |
4.0 TB | 3.4 - 3.41 Å |
| 2026-07-13 |  |
Cryo electron micrographs of 3-methylcrotonyl-CoA carboxylase and its variable α-Cap Assemblies in Legionella pneumophila [31641 micrographs in MRC format] | Durie CL [Pubmed: 41509382] [DOI: 10.64898/2025.12.22.694428] |
988.8 GB | 2.13 - 2.68 Å |
| 2026-07-29 |  |
gRNAde designed RNA molecule [10689 multi-frame micrographs composed of 1134 frames each in EER format] | Spellmon NS, Haack DBH, Joshi CJ, Rudolfs BR, Hingey JH, Mancino AM, Yu ZY, Toor NT, Das RD | 4.4 TB | 2.9 Å |
| 2026-09-21 |  |
MPNN-fixbb designed RNA molecule [12594 multi-frame micrographs composed of 1116 frames each in EER format] | Haack DBH, Spellmon NS, Favor AF, Kubaney AK, Baker DB, Rudolfs BR, Hingey JH, Mancino AM, Yu ZY, Toor NT, Das RD [Pubmed: 42658941] [DOI: 10.1126/science.aeg6829] |
5.4 TB | 4.0 Å |
| 2026-07-29 |  |
Struct2SeQ designed RNA molecule [17275 multi-frame micrographs composed of 1017 frames each in EER format] | Mancino AM, Hingey JH, He SH, Haack DBH, Rudolfs BR, Spellmon NS, Yu ZY, Toor NT, Das RD | 6.5 TB | 4.7 Å |
| 2026-07-29 |  |
MPNN-RFdiff designed RNA molecule [15834 multi-frame micrographs composed of 1116 frames each in EER format] | Hingey JH, Spellmon NS, Favor AF, Kubaney AK, Baker DB, Haack DBH, Rudolfs BR, Mancino AM, Yu ZY, Toor NT, Das RD | 6.3 TB | 4.8 Å |
