Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-05-14 | Aligned tilt series of stationary phase Burkholderia thailandensis tomograms [40 tilt series in MRC format] | Welch MD, Khanna K [Pubmed: 38725941] [DOI: 10.17912/micropub.biology.001178] |
26.9 GB | — | |
| 2026-03-30 | Aligned, dose-weighted electron micrographs of His-tagged Exo84 and Sro7 on NI-NTA lipid monolayer grids [4970 micrographs in MRC format] | Brennwald P, Strauss JD, Baker RW [Pubmed: 41083086] [DOI: 10.1016/j.jsb.2025.108253] |
436.4 GB | 3.1 Å | |
| 2026-02-12 | All cryo-SXT data used for the obtention of the results shown in the article [89 multi-frame micrographs composed of 1 frames each in BIG DATA VIEWER HDF5 format] | Iglesias-Fernandez M, Pérez-Berná A, Pereiro E, Espanol Pons M, Ginebra Molins MP | 90.1 GB | — | |
| 2024-08-13 | Alligator haemoglobin in carbonmonoxy form [multiple data sets in TIFF format] | Takahashi K, Lee Y, Nishizawa T, Tame JRH [Pubmed: 39090102] [DOI: 10.1038/s41467-024-49947-x] |
964.3 GB | 2.29 Å | |
| 2024-08-13 | Alligator haemoglobin in deoxy form [multiple data sets in TIFF format] | Takahashi K, Lee Y, Nishizawa T, Tame JRH [Pubmed: 39090102] [DOI: 10.1038/s41467-024-49947-x] |
1.9 TB | 2.2 Å | |
| 2024-08-11 | Alligator haemoglobin in oxy form [multiple data sets in TIFF format] | Takahashi K, Lee Y, Nishizawa T, Tame JRH [Pubmed: 39090102] [DOI: 10.1038/s41467-024-49947-x] |
2.6 TB | 2.31 Å | |
| 2021-03-24 | Alpha-E-catenin ABD-F-actin complex [7317 multi-frame micrographs composed of 40 frames each in TIFF format] | Mei L, Alushin GM [Pubmed: 32969337] [DOI: 10.7554/eLife.62514] |
2.4 TB | 3.2 Å | |
| 2022-11-14 | Amyloid fibril from the antimicrobial peptide aurein 3.3 [multiple data sets in TIFF and MRCS formats] | Bücker R, Seuring C, Cazey C, Veith K, Garcia-Alai M, Grünewald K, Landau M [Pubmed: 35896552] [DOI: 10.1038/s41467-022-32039-z] |
5.2 TB | 3.5 Å | |
| 2022-11-15 | Amyloid fibril from the antimicrobial peptide uperin 3.5 [multiple data sets in TIFF, MRC and MRCS formats] | Bücker R, Seuring C, Cazey C, Veith K, Garcia-Alai M, Grünewald K, Landau M [Pubmed: 35896552] [DOI: 10.1038/s41467-022-32039-z] |
7.4 TB | 3.0 Å | |
| 2022-12-16 | Amyloid fibril structure from the vascular variant of systemic AA amyloidosis [multiple data sets in TIFF format] | Banerjee S, Baur J, Daniel C, Pfeiffer PB, Hitzenberger M, Kuhn L, Wiese S, Bijzet J, Haupt C, Amann KU, Zacharias M, Hazenberg BPC, Westermark GT, Schmidt M, Fändrich M [Pubmed: 36433936] [DOI: 10.1038/s41467-022-34636-4] |
1009.8 GB | 2.56 Å | |
| 2018-06-20 | An atomic structure of human gamma-secretase [2925 multi-frame micrographs composed of 20 frames each in MRCS format] | Bai XC, Yan C, Yang G, Lu P, Ma D, Sun L, Zhou R, Scheres SHW, Shi Y [Pubmed: 26280335] [DOI: 10.1038/NATURE14892] |
11.7 TB | 3.4 Å | |
| 2026-06-04 | An auto inhibitory loop in the MiDAC histone deacetylase complex [11093 multi-frame micrographs composed of 50 frames each in TIFF format] | Fairall L, Schwabe JWR [Pubmed: 41290615] [DOI: 10.1038/s41467-025-65472-x] |
2.3 TB | 2.75 - 2.92 Å | |
| 2022-01-28 | Anaplastic lymphoma kinase (ALK) extracellular fragment of ligand binding region 648-1025 in complex with AUG-alpha [multiple data sets in TIFF and MRC formats] | Reshetnyak AV, Myasnikov AG, Kalodimos CG [Pubmed: 34819673] [DOI: 10.1038/s41586-021-04140-8] |
10.2 TB | 2.27 Å | |
| 2026-07-31 | Antibody (1B2) Bound Crosslinked Rifamycin Synthetase Module 1 with a C-terminal Type II Thioesterase [7631 multi-frame micrographs composed of 50 frames each in TIFF format] | Cogan DP [Pubmed: 40631255] [DOI: 10.1101/2025.07.05.663307] |
1.3 TB | 3.96 Å | |
| 2026-07-30 | Antibody (1B2) Bound Rifamycin Synthetase Module 1 [10005 multi-frame micrographs composed of 50 frames each in TIFF format] | Cogan DP [Pubmed: 40631255] [DOI: 10.1101/2025.07.05.663307] |
3.1 TB | 3.22 - 3.96 Å | |
| 2026-08-07 | Antibody (1B2) Bound Rifamycin Synthetase Module 2 [10263 multi-frame micrographs composed of 50 frames each in MRC format] | Cogan DP | 968.5 GB | 2.94 Å | |
| 2023-01-03 | Apo C-terminal half of LRRK2 (I2020T) bound to microtubule [2379 multi-frame micrographs composed of 50 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
643.9 GB | 7.0 Å | |
| 2024-02-28 | Apo Malacoceros FaNaC1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1013.1 GB | 2.7 Å | |
| 2023-01-26 | Apo-ChRmine in MSP1E3D1 lipid nanodisc [5339 multi-frame micrographs composed of 50 frames each in TIFF format] | Tucker KCT, Brohawn SGB [Pubmed: 35977941] [DOI: 10.1038/s41467-022-32441-7] |
3.5 TB | 4.1 Å | |
| 2019-12-20 | Apo-state Streptavidin [multiple data sets in MRCS format] | Han Y, Fan X, Wang H, Zhao F, Tully CG, Kong J, Yao N, Yan N [Pubmed: 31879346] [DOI: 10.1073/pnas.1919114117] |
922.4 GB | 2.6 Å | |
| 2021-11-15 | Apoferritin 1.7% glycerol, 200kV [1707 multi-frame micrographs composed of 113 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
708.2 GB | 2.3 Å | |
| 2021-11-15 | Apoferritin 20% glycerol, 200kV [2254 multi-frame micrographs composed of 110 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
875.6 GB | 2.3 Å | |
| 2021-11-15 | Apoferritin 20% glycerol, 300kV [1859 multi-frame micrographs composed of 35 frames each in TIFF format] | Basanta B, Hirschi MM, Grotjahn DA, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
477.7 GB | 2.1 Å | |
| 2024-11-19 | Apoferritin data taken with laser-off [108 multi-frame micrographs composed of 150 frames each in TIFF format] | Remis JP [Pubmed: 39536845] [DOI: 10.1016/j.jsb.2024.108150] |
38.2 GB | 2.6 Å | |
| 2024-11-19 | Apoferritin data taken with laser-on [209 multi-frame micrographs composed of 150 frames each in TIFF format] | Remis JP, Remis JP [Pubmed: 39536845] [DOI: 10.1016/j.jsb.2024.108150] |
52.0 GB | 2.7 Å |