Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-06-08 |  |
Time-resolved cryo-EM particle stacks [multiple data sets in MRC format] | Greene E, Muniz R, Yamamura H, Hoff SE, Bajaj P, Lee DJ, Thompson EM, Arada A, Lee GM, Bonomi M, Kollman JM, Fraser JS [Pubmed: 40631248] [DOI: 10.1101/2025.07.04.663231] |
8.9 TB | 2.03 Å |
| 2025-02-10 |  |
TniQ-capped TnsC-ATP-dsDNA complex [multiple data sets in TIFF and DM4 formats] | Querques I, Schmitz M, Oberli S, Chanez C, Jinek M [Pubmed: 36435179] [DOI: 10.1016/j.cell.2022.11.009] |
2.9 TB | 3.44 Å |
| 2025-06-30 |  |
TnsB strand transfer complex micrographs [4728 multi-frame micrographs composed of 1 frames each in MRC format] | Tenjo-Castaño F, Sofos N, López-Méndez B, Stutzke LS, Fuglsang A, Stella S, Montoya G [Pubmed: 36184667] [DOI: 10.1038/s41467-022-33504-5] |
3.8 TB | 2.46 Å |
| 2015-01-16 |  |
Tobacco Mosaic Virus Falcon II dataset including manually boxed helix coordinates [109 multi-frame micrographs composed of 7 frames each in MRC format] | Fromm SA, Bharat TAM, Jakobi AJ, Hagen WJH, Sachse C [Pubmed: 25528571] [DOI: 10.1016/j.jsb.2014.12.002] |
47.7 GB | 3.35 - 4.2 Å |
| 2015-01-16 |  |
Tobacco Mosaic Virus Falcon II dataset including manually boxed helix coordinates [28 multi-frame micrographs composed of 16 frames each in MRC format] | Fromm SA, Bharat TAM, Jakobi AJ, Hagen WJH, Sachse C [Pubmed: 25528571] [DOI: 10.1016/j.jsb.2014.12.002] |
28.0 GB | 3.7 Å |
| 2015-01-16 |  |
Tobacco Mosaic Virus K2 Summit dataset including manually boxed helix coordinates [14 multi-frame micrographs composed of 22 frames each in MRC format] | Fromm SA, Bharat TAM, Jakobi AJ, Hagen WJH, Sachse C [Pubmed: 25528571] [DOI: 10.1016/j.jsb.2014.12.002] |
15.7 GB | 4.0 Å |
| 2023-02-13 |  |
Tobacco mosaic virus, imaged on a JEOL CRYOARM 300 and Direct Electron Apollo [3402 multi-frame micrographs composed of 45 frames each in TIFF format] | Bhella D, Love AJ, Streetley J, Taliansky M, McGeachy K, Bukharova T | 1.1 TB | 1.85 Å |
| 2024-07-04 |  |
Tomograms and the raw 2d tilt series of ER-ER junctions of HeLa cells in interphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
304.4 GB | — |
| 2024-07-04 |  |
Tomograms and the raw 2d tilt series of ER-ER/nuclear envelope junctions of HeLa cells in late anaphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
305.3 GB | — |
| 2024-07-04 |  |
Tomograms and the raw 2d tilt series of ER-nuclear envelope junctions of HeLa cells in early telophase [multiple data sets in TIFF and MRC formats] | Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
334.1 GB | — |
| 2024-07-04 |  |
Tomograms and the raw 2d tilt series of ER-nuclear envelope junctions of HeLa cells in interphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
434.0 GB | — |
| 2022-11-07 |  |
Topological Crossing in the Misfolded Tetrahymena Ribozyme Resolved by Cryo-EM [42382 micrographs in MRC format] | Li S, Palo M, Pintilie GD, Zhang X, Su Z, Kappel K, Chiu W, Zhang K, Das R [Pubmed: 36067294] [DOI: 10.1073/pnas.2209146119] |
3.6 TB | 3.01 - 4.01 Å |
| 2024-11-19 |  |
Training Set for CryoVesNet - Cryo-electron tomograms of rat synaptosomes and synaptic vesicle segmentation [multiple data sets in MRC format] | Khosrozadeh A, Seeger R, Witz G, Radecke J, Sørensen JB, Zuber B [Pubmed: 36876590] [DOI: 10.1101/2022.04.10.487799] |
8.9 GB | — |
| 2021-10-01 |  |
Training data set for automated 2D class selection [18051 class averages in MRCS format] | Kimanius D, Dong L, Sharov G, Nakane T, Scheres SHW [Pubmed: 34783343] [DOI: 10.1042/bcj20210708] |
20.7 GB | — |
| 2026-04-09 |  |
Transcription co-inhibition alters drug resistance evolution and enhances Mycobacterium tuberculosis clearance from granulomas [14455 multi-frame micrographs composed of 50 frames each in TIFF format] | Barbara B, Lilic M, Campbell EA [Pubmed: 41339746] [DOI: 10.1038/s41564-025-02201-6] |
7.4 TB | 2.97 Å |
| 2021-01-15 |  |
Transcription-translation coupling complex (TEC27_NusG_CHAPSO) [21 micrographs in MRC format] | Ebright RHE [Pubmed: 32820061] [DOI: 10.1126/science.abb5317] |
201.5 GB | 4.7 Å |
| 2023-01-30 |  |
Translating 70S ribosome [19449 multi-frame micrographs composed of 1295 frames each in EER format] | Fromm SA, O'Connor KM, Purdy M, Bhatt PR, Loughran G, Atkins JF, Jomaa A, Mattei S [Pubmed: 36841832] [DOI: 10.1038/s41467-023-36742-3] |
7.1 TB | 1.55 Å |
| 2022-06-14 |  |
Transmission electron micrographs of mouse RNF213 in a chemically-stabilized complex with human UBE2L3 [4591 multi-frame micrographs composed of 40 frames each in TIFF format] | Ahel J, Weis F, Clausen T | 2.1 TB | 3.5 Å |
| 2022-06-14 |  |
Transmission electron micrographs of mouse RNF213 incubated with ATPγS [multiple data sets in TIFF format] | Ahel J, Weis F, Clausen T | 2.3 TB | 4.0 Å |
| 2026-07-07 |  |
Transporter associated with antigen processing (TAP) EQ mutant bound to ATP [8950 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J [Pubmed: 40885191] [DOI: 10.1016/j.immuni.2025.08.003] |
4.8 TB | 3.1 - 3.7 Å |
| 2025-12-22 |  |
Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein CPXV012 from cowpox virus [24354 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 12.6 TB | 3.0 Å |
| 2025-12-22 |  |
Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein bUL49.5 from bovine herpesvirus [19307 multi-frame micrographs composed of 1098 frames each in TIFF format] | Lee J, Manon V, Chen J | 8.6 TB | 2.44 - 3.1 Å |
| 2025-12-22 |  |
Transporter associated with antigen processing (TAP) bound to ATP and ADP [13928 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.5 TB | 3.2 - 3.7 Å |
| 2025-12-07 |  |
Transporter associated with antigen processing (TAP) bound to ATP, ADP, and the viral protein rhUS6 from rhesus cytomegalovirus [18184 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.7 TB | 3.3 Å |
| 2024-07-18 |  |
Transporter associated with antigen processing (TAP) bound to the 14-mer peptide LPAVVGLSPGEQEY [16272 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [DOI: 10.1101/2023.06.16.545308] |
5.5 TB | 3.9 Å |
