Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
2.3 GB | — |
| 2023-10-09 |  |
Quantitative subcellular reconstruction reveals a lipid mediated inter-organelle biogenesis network [multiple data sets in TIFF format] | Lee RG, Rudler DL, Raven SA, Peng L, Chopin A, Moh ESX, McCubbin T, Siira SJ, Fagan SV, DeBono NJ, Stentenbach M, Browne J, Rackham FF, Li J, Simpson KJ, Marcellin E, Packer NH, Reid GE, Padman BS, Rackham O, Filipovska A | 434.2 GB | — |
| 2025-09-16 |  |
Rapid Hepatitis C Virus Replication Machinery Removal After Antiviral 1 Treatment with DAA Monitored By Multimodal Imaging [300 reconstructed volumes in TIFF format] | Castro V, Calvo G, Perez-Berna AJ, Mamprin K, Kapishnikov S, Rogers D, O'Connor S, Sheridan P, Fahy K, Pereiro E, Gastaminza P [Pubmed: 40553718] [DOI: 10.1016/j.str.2025.05.015] |
3.4 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2021-04-14 |  |
Cytoklepty in the plankton: a host strategy to optimize the bioenergetic machinery of endosymbiotic algae [500 multi-frame micrographs composed of 1 frames each in TIFF format] | Uwizeye C, Mars Brisbin M, Gallet B, LeKieffre C, Schieber NL, Wangpraseurt D, Decelle J [Pubmed: bioRxiv] [DOI: 10.1101/2020.12.08.416644] |
2.9 GB | — |
| 2026-02-26 |  |
Heterogeneous Assembly of Herpesvirus Capsids In Situ Illuminated by Cryo-FIB/ET. [multiple data sets in MRC and TIFF formats] | Oliver SL | 3.3 TB | — |
| 2026-02-13 |  |
Unaligned Movies of E. coli grown at 37°C clarified cell lysate [9748 multi-frame micrographs composed of 45 frames each in TIFF format] | May MB [Pubmed: 40894545] [DOI: 10.1101/2025.08.21.669550] |
2.4 TB | — |
| 2018-05-02 |  |
Correlative microscopy of vitreous sections provides insights into BAR-domain organisation in situ [9 tilt series in MRC format] | Bharat TAM, Hoffmann PC, Kukulski W [Pubmed: 29681471] [DOI: 10.1016/j.str.2018.03.015] |
27.9 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2022-01-28 |  |
CryoET of presequence protease single particle [multiple data sets in TIFF and MRC formats] | Liang WG, Wijaya J, Wei H, Noble AJ, Mancl JM, Mo S, Lee D, Lin King JV, Pan M, Liu C, Koehler CM, Zhao M, Potter CS, Carragher B, Li S, Tang WJ [Pubmed: 35383169] [DOI: 10.1038/s41467-022-29322-4] |
25.4 GB | — |
| 2024-08-23 |  |
Exploring the 3D structure of chromosomes in mitotic cells [multiple data sets in TIFF and DM4 formats] | Cisneros- Soberanis F, Beckett AJ, Simpson E, Pucekova N, Prior IA, Booth DG, Earnshaw WC [Pubmed: 39186086] [DOI: 10.1083/jcb.202403165] |
31.6 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2026-02-11 |  |
Unaligned Movies of E. coli grown at 25°C clarified cell lysate [7908 multi-frame micrographs composed of 45 frames each in TIFF format] | May MB, Lopez Perez GS, Davis JH [Pubmed: 40894545] [DOI: 10.1101/2025.08.21.669550] |
2.0 TB | — |
| 2023-05-10 |  |
Microtubule depolymerization contributes to spontaneous neurotransmitter release [multiple data sets in MRC format] | Velasco C, Santarella-Mellwig R, Schorb M, Gao L, Thorn-Seshold O, Llobet A [Pubmed: 37147475] [DOI: 10.1038/s42003-023-04779-1] |
123.8 GB | — |
| 2024-09-06 |  |
Cryo-electron tomography of Polyphosphate condensate [35 tilt series in MRC format] | Racki LR, Deniz AA, Park D [Pubmed: 39462120] [DOI: 10.1038/s41467-024-53469-x] |
267.4 GB | — |
| 2024-05-14 |  |
Aligned tilt series of stationary phase Burkholderia thailandensis tomograms [40 tilt series in MRC format] | Welch MD, Khanna K [Pubmed: 38725941] [DOI: 10.17912/micropub.biology.001178] |
26.9 GB | — |
| 2024-09-03 |  |
Volume correlative light X-ray and electron microscopy (CLXEM) of mouse cremaster muscle endothelial cells [multiple data sets in TIFF format] | Reglero-Real N, Pérez-Gutiérrez L, Saleeb R, Nourshargh S, Collinson L, Yoshimura A [DOI: 10.1016/j.xpro.2024.103257] |
79.2 GB | — |
| 2021-06-18 |  |
Subtomograms of nucleosomes extracted from cryo-tomograms of Drosophila melanogaster embryos [1 subtomograms in EM format] | Harastani M, Eltsov M, Leforestier A, Jonic S [Pubmed: 34095222] [DOI: 10.3389/fmolb.2021.663121] |
666.3 MB | — |
| 2022-05-11 |  |
Tilt series and tomograms of cells expressing different non structural proteins (NSPs) of SARS-CoV-2 [multiple data sets in MRC format] | Polshchuk RS, Polishchuk E, De Matteis MA [Pubmed: 35551511] [DOI: 10.1038/s41586-022-04835-6] |
107.1 GB | — |
| 2026-04-13 |  |
Synchrotron radiation micro-computed tomography of the small-spotted catshark embryonic development (Chondrichthyes: Scyliorhinus canicula) [1 reconstructed volumes in TIFF format] | Escamilla-Vega E, Koch AK, Seton LWG, Murillo-Rincón AP, Kyomen S, Hammel JU, Moritz T, Kaucká M | 4.7 TB | — |
| 2018-04-05 |  |
CryoET of apoferritin single particle with spot-to-plunge time of 100ms [multiple data sets in MRC and Other formats] | Noble AJ, Wei H, Dandey VP, Zhang Z, Potter CS, Carragher B [Pubmed: 30250056] [DOI: 10.1038/s41592-018-0139-3] |
119.3 GB | — |
| 2023-03-13 |  |
FIB-SEM images about Control/OPA1 KD NIH-3T3 cells [1984 multi-frame micrographs composed of 1 frames each in TIFF format] | Suga S, Nakamura K, Kawai H, Hirabayashi Y [DOI: 10.1101/2021.06.11.448083] |
46.8 GB | — |
| 2025-07-08 |  |
Electron tomography - Myotubes:Fam134bKO and WT [2 reconstructed volumes in MRC format] | Grumati G, Cortese M, Swuec P, Silva M | 1.4 GB | — |
| 2018-04-05 |  |
CryoET of apoferritin single particle with spot-to-plunge time of 400ms [multiple data sets in MRC and Other formats] | Noble AJ, Wei H, Dandey VP, Zhang Z, Potter CS, Carragher B [Pubmed: 30250056] [DOI: 10.1038/s41592-018-0139-3] |
98.8 GB | — |
