Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-03 | GLIC F116A mutant in MSP1E3D1 nanodisc at pH 2.5 [11131 multi-frame micrographs composed of 1575 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
7.3 TB | 2.14 Å | |
| 2023-09-22 | Sheared F-actin raw data from Structures of the free and capped ends of the actin filament [multiple data sets in TIFF format] | Carman PJ, Barrie KR, Rebowski G, Dominguez R [Pubmed: 37228182] [DOI: 10.1126/science.adg6812] |
7.3 TB | 3.3 Å | |
| 2023-05-11 | HMP1/alpha-catenin monomer [multiple data sets in TIFF and MRC formats] | Rangarajan ES, Smith EW, Izard T [Pubmed: 36539037] [DOI: 10.1016/j.jbc.2022.102817] |
7.3 TB | 7.8 Å | |
| 2024-11-08 | Cryo-EM structure of the gastric proton pump [multiple data sets in TIFF format] | Abe K, Yokoshima S, Yoshimori A [Pubmed: 37726448] [DOI: 10.1038/s42003-023-05334-8] |
7.3 TB | 2.08 - 2.26 Å | |
| 2022-11-15 | Amyloid fibril from the antimicrobial peptide uperin 3.5 [multiple data sets in TIFF, MRC and MRCS formats] | Bücker R, Seuring C, Cazey C, Veith K, Garcia-Alai M, Grünewald K, Landau M [Pubmed: 35896552] [DOI: 10.1038/s41467-022-32039-z] |
7.4 TB | 3.0 Å | |
| 2023-09-22 | Short and capped F-actin raw data from Structures of the free and capped ends of the actin filament [multiple data sets in TIFF format] | Carman PJ, Barrie KR, Rebowski G, Dominguez R [Pubmed: 37228182] [DOI: 10.1126/science.adg6812] |
7.4 TB | 2.26 - 3.26 Å | |
| 2022-09-09 | S. cerevisiae Gea2 [multiple data sets in TIFF format] | Muccini AJ, Fromme JC [Pubmed: 36044848] [DOI: 10.1016/j.celrep.2022.111282] |
7.4 TB | 3.9 - 4.7 Å | |
| 2026-03-02 | Patient derived AD PHF with PET Ligand MK-6240 [multiple data sets in TIFF format] | Kunach P, Vaquer-Alicea J, Smith MS, Monistrol J, Hopewell R, Moquin L, Therriault J, Tissot C, Rahmouni N, Massarweh G, Soucy JP, Guiot MC, Shoichet BK, Rosa-Neto P, Diamond MI, Shahmoradian SH [Pubmed: 39353896] [DOI: 10.1038/s41467-024-52265-x] |
7.4 TB | 2.31 Å | |
| 2026-07-12 | Single-particle Cryo Electron Microscopy of Human Cytomegalovirus Protease Bound to an Inhibitory Antibody Fragment [multiple data sets in EER and MRC formats] | Zimanyi M, Hulce KR, Bohn M, Norman J, Rohweder PJ, Cheng Y, Craik CS, Detomasi TC [DOI: 10.1101/2025.10.17.683123] |
7.4 TB | 2.57 - 2.7 Å | |
| 2024-03-21 | Single particle Cryo EM of the C-terminal half LRRK2 I2020T mutant bound to GZD-824 [8386 multi-frame micrographs composed of 50 frames each in EER format] | Villagran Suarez A, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.4 TB | 3.1 Å | |
| 2026-04-09 | Transcription co-inhibition alters drug resistance evolution and enhances Mycobacterium tuberculosis clearance from granulomas [14455 multi-frame micrographs composed of 50 frames each in TIFF format] | Barbara B, Lilic M, Campbell EA [Pubmed: 41339746] [DOI: 10.1038/s41564-025-02201-6] |
7.4 TB | 2.97 Å | |
| 2023-07-18 | Purified tails from bacteriophage T5 [3208 multi-frame micrographs composed of 40 frames each in MRC format] | Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C [Pubmed: 36961893] [DOI: 10.1126/sciadv.ade9674] |
7.5 TB | 3.45 - 4.22 Å | |
| 2026-06-09 | Cryo-EM structure of Chikungunya virus asymmetric unit with Fab IM-CKV063 [14504 multi-frame micrographs composed of 40 frames each in MRC format] | Su GCS, Galaz-Montoya JG, Pintilie GP, Jin JJ, Chiu WC | 7.5 TB | 3.5 - 4.8 Å | |
| 2024-03-26 | Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a tetrameric form [17529 multi-frame micrographs composed of 75 frames each in TIFF format] | Wang FW [Pubmed: 37040767] [DOI: 10.1016/j.str.2023.03.010] |
7.6 TB | 3.5 Å | |
| 2020-08-18 | CryoEM structure of human CMG bound to ATPgammaS and DNA [3694 multi-frame micrographs composed of 40 frames each in MRC format] | Rzechorzek NJ, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
7.7 TB | 3.29 - 3.41 Å | |
| 2026-06-11 | Single particle cryo-EM of Staphylococcus aureus YhaM D193A hexamers in complex with double-stranded substrate RNA derived from hpf mRNA [15724 multi-frame micrographs composed of 60 frames each in EER format] | Mattingly JM, Tanquary JR, Dunham CM | 7.7 TB | 3.2 - 3.5 Å | |
| 2026-04-15 | Single Particle Raw Images for nicotinic receptor alpha 7 in complex with conotoxin ImIl [13612 multi-frame micrographs composed of 50 frames each in TIFF format] | Stowell MHB, Bhattacharjee B, Noviello CM, Rahman MM, Hibbs RE [Pubmed: 41468893] [DOI: 10.1016/j.str.2025.12.003] |
7.7 TB | 3.06 Å | |
| 2026-03-23 | Ribosomal RNA modifications around the peptidyl transfer center stimulate catalytic activity and prevent the formation of alternative structures [multiple data sets in MRC and TIFF formats] | Larsson DSD, Selmer M [DOI: 10.64898/2026.03.01.708810] EMD-55349 EMD-55427 EMD-55428 EMD-55429 EMD-55430 EMD-55432 EMD-55433 EMD-55434 EMD-55435 EMD-55436 EMD-55437 EMD-55415 EMD-55467 EMD-55468 EMD-55469 EMD-55470 EMD-55471 EMD-55472 EMD-55473 EMD-55474 EMD-55475 EMD-55476 EMD-55618 EMD-55702 EMD-55703 EMD-55704 EMD-55705 EMD-55706 EMD-55707 EMD-55708 EMD-55709 EMD-55710 EMD-55711 |
7.7 TB | 1.87 - 3.07 Å | |
| 2023-10-23 | High-throughput electron tomography identifies centriole over-elongation in plasma cell disorders [multiple data sets in MRC format] | Köhrer S, Dittrich T, Schorb M, Weinhold N, Haberbosch I, Börmel M, Pajor G, Goldschmidt H, Müller-Tidow C, Raab MS, John L, Seckinger A, Brobeil A, Dreger P, Tornóczky T, Pajor L, Hegenbart U, Schönland SO, Schwab Y, Krämer A [Pubmed: 37821581] [DOI: 10.1038/s41375-023-02056-y] |
7.7 TB | — | |
| 2023-07-25 | Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13 [multiple data sets in TIFF and MRC formats] | Kim SK, Dickinson MS, Finer-Moore J, Stroud RM [Pubmed: 36782050] [DOI: 10.1038/s41594-022-00918-0] |
7.7 TB | 1.94 - 3.1 Å | |
| 2025-10-21 | Single particle cryo-EM of Mycobacterium tuberculosis UvrA and UvrB complexes with DNA [21234 multi-frame micrographs composed of 40 frames each in TIFF format] | Genta M, Chaves-Sanjuan A, Miggiano R [Pubmed: 40210888] [DOI: 10.1038/s41467-025-58670-0] |
7.7 TB | 3.2 - 4.3 Å | |
| 2024-02-06 | SpCas9 bound to 18 nucleotide complementary DNA substrate in the checkpoint state [multiple data sets in EER format] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
7.7 TB | 2.54 Å | |
| 2022-06-17 | Single particle cryogenic electron micrographs of tetrahymena mitochondrial electron transport chain complexes [multiple data sets in TIFF and MRC formats] | Zhou L, Guo F, Letts JA [Pubmed: 35357889] [DOI: 10.1126/science.abn7747] |
7.8 TB | 2.6 Å | |
| 2025-07-03 | Single particle Cryo EM of the C-terminal half LRRK2 G2019S mutant bound to MLi-2 [8788 multi-frame micrographs composed of 50 frames each in EER format] | Sanz Murillo M, Villagran Suarez A, Dederer V, Chatterjee D, Alegrio Louro J, Knapp S, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.9 TB | 2.7 Å | |
| 2023-05-16 | Cryo-Electron microscopy of the antimicrobial peptide Drosocin from Drosophila melanogaster bound to the E.coli 70S ribosome. [8861 multi-frame micrographs composed of 1532 frames each in EER format] | Koller TO, Morici M, Berger M, Safdari HA, Beckert B, Wilson DN [Pubmed: 36997646] [DOI: 10.1038/s41589-023-01293-7] |
7.9 TB | 2.1 - 2.8 Å |