Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-07-30 |  |
Turnip Crinkle Virus: virus-like particles (TCV-P38) [multiple data sets in MRC and TIFF formats] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 2.8 TB | 3.47 Å |
| 2025-07-25 |  |
Turnip Crinkle Virus: virus-like particles (TCV-P38+1) [multiple data sets in TIFF format] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 918.5 GB | 3.13 Å |
| 2025-04-24 |  |
Turnover condition dataset for Bacillus subtilis class Ib ribonucleotide reductase [4537 multi-frame micrographs composed of 50 frames each in TIFF format] | Xu D, Thomas WC, Burnim AA, Ando N [Pubmed: 40075098] [DOI: 10.1038/s41467-025-57735-4] |
1.4 TB | 2.53 - 4.64 Å |
| 2022-02-24 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 1 [331 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
476.1 GB | 2.07 Å |
| 2022-03-08 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 2 [4000 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
1.5 TB | 1.92 Å |
| 2022-02-22 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 3 [1259 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
839.8 GB | 3.13 - 3.23 Å |
| 2020-03-04 |  |
Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy [1713 micrographs in MRC format] | Guerrero-Ferreira R, Taylor NM, Arteni AA, Kumari P, Mona D, Ringler P, Britschgi M, Lauer ME, Makky A, Verasdonck J, Riek R, Melki R, Meier BH, Böckmann A, Bousset L, Stahlberg H [Pubmed: 31815671] [DOI: 10.7554/eLife.48907] |
90.9 GB | 2.98 - 3.4 Å |
| 2025-01-21 |  |
Type six secretion system exported effector 5 (Tse5) [10244 multi-frame micrographs composed of 50 frames each in EER format] | Gonzalez-Magana A, Tascon I, Altuna-Alvarez J, Velazquez C, Zabala M, Ubarretxena-Belandia I, Albesa-Jove D [Pubmed: 38016939] [DOI: 10.1038/s41467-023-43585-5] |
11.3 TB | 2.45 Å |
| 2025-11-30 |  |
Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex A [3636 multi-frame micrographs composed of 1512 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.8 TB | 2.97 Å |
| 2025-11-18 |  |
Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex B [3274 multi-frame micrographs composed of 1519 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.6 TB | 3.23 Å |
| 2025-11-18 |  |
Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex C [4473 multi-frame micrographs composed of 2639 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
4.3 TB | 3.31 Å |
| 2024-07-12 |  |
UFM1 ribosome E3 ligase complex bound to the 60S ribosomal subunit [multiple data sets in EER and MRC formats] | Makhlouf L [Pubmed: 38383789] [DOI: 10.1038/s41586-024-07093-w] |
22.6 TB | 2.2 - 3.2 Å |
| 2023-01-25 |  |
Ubiquitinated FANCI in complex with FANCD2 and double-stranded DNA [multiple data sets in TIFF format] | Lemonidis K, Rennie ML, Arkinson C, Chaugule VK, Clarke M, Streetley J, Walden H [Pubmed: 36385258] [DOI: 10.15252/embj.2022111898] |
2.9 TB | 4.14 Å |
| 2021-02-12 |  |
Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 15,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
| 2020-05-27 |  |
Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 20,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
| 2021-02-12 |  |
Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 6,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
| 2021-02-12 |  |
Ultra-high voltage electron microscope tomography tilt series of neurite section [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
| 2026-02-11 |  |
Unaligned Movies of E. coli grown at 25°C clarified cell lysate [7908 multi-frame micrographs composed of 45 frames each in TIFF format] | May MB, Lopez Perez GS, Davis JH [Pubmed: 40894545] [DOI: 10.1101/2025.08.21.669550] |
2.0 TB | — |
| 2026-02-13 |  |
Unaligned Movies of E. coli grown at 37°C clarified cell lysate [9748 multi-frame micrographs composed of 45 frames each in TIFF format] | May MB [Pubmed: 40894545] [DOI: 10.1101/2025.08.21.669550] |
2.4 TB | — |
| 2023-06-23 |  |
Unaligned and aligned cryo-EM micrographs of 82-kDa malate synthase G [multiple data sets in TIFF format] | Wu K.-P. [Pubmed: 36997036] [DOI: 10.1016/j.jsb.2023.107958] |
227.3 GB | 2.89 - 4.14 Å |
| 2023-08-18 |  |
Unaligned cryo-EM micrographs of AL55 amyloid fibrils extracted from the kidney of an AL amyloidosis patient [1819 multi-frame micrographs composed of 40 frames each in MRC format] | Chaves-Sanjuan A, Puri S, Schulte T, Ricagno S [Pubmed: 37516426] [DOI: 10.1016/j.jmb.2023.168215] |
1.0 TB | 4.0 Å |
| 2025-03-21 |  |
Unaligned cryo-EM micrographs of HCN4 channel bound to Ivabradine [31670 multi-frame micrographs composed of 40 frames each in TIFF format] | Saponaro A, Chaves-Sanjuan A, Sharifzadeh AS, Clarke OB, Marabelli C, Bolognesi M, Thiel G, Moroni A [Pubmed: 38917012] [DOI: 10.1073/pnas.2402259121] |
9.3 TB | 3.6 Å |
| 2023-06-27 |  |
Unaligned cryo-EM micrographs of Human SHMT1 in complex with RNA [5450 multi-frame micrographs composed of 40 frames each in TIFF format] | Spizzichino S, Marabelli C, Chaves-Sanjuan A, Bolognesi M, Giardina G, Cutruzzola F [Pubmed: 38996576] [DOI: 10.1016/j.molcel.2024.06.016] |
3.9 TB | 3.52 Å |
| 2021-02-10 |  |
Unaligned movies for FA core complex and symmetric complex [multiple data sets in TIFF format] | Passmore LA, Shakeel S [Pubmed: 31666700] [DOI: 10.1038/s41586-019-1703-4] |
13.2 TB | 4.2 Å |
| 2021-02-10 |  |
Unaligned movies for FANCD2 dimer [6218 multi-frame micrographs composed of 40 frames each in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
3.7 TB | 3.4 Å |
