Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-10-10 | Structural basis for directional rotation of the Salmonella flagellum [39322 multi-frame micrographs composed of 50 frames each in TIFF format] | Singh PK, Iverson TM [Pubmed: 38632342] [DOI: 10.1038/s41564-024-01674-1] |
9.1 TB | 3.4 - 6.7 Å | |
| 2025-12-22 | Complex of BREX proteins BrxB and PglZ from Salmonella typhimurium [multiple data sets in MRC and TIFF formats] | Doyle LA, Stoddard BL, Kaiser BK, Blower TR [Pubmed: 40548935] [DOI: 10.1093/nar/gkaf540] |
9.1 TB | 4.45 Å | |
| 2024-04-12 | Structural basis for directional rotation of the Salmonella flagellum [34381 multi-frame micrographs composed of 50 frames each in TIFF format] | Singh PK, Iverson TM [Pubmed: 38632342] [DOI: 10.1038/s41564-024-01674-1] |
9.1 TB | 3.4 - 6.7 Å | |
| 2025-11-04 | Cas1-2/3 integration complex, 34 bp foreign DNA with PAM, CRISPR leader-repeat-spacer DNA fragment [multiple data sets in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
9.1 TB | 4.0 Å | |
| 2026-02-10 | In situ structure of bacterial 50S ribosomes [28790 multi-frame micrographs composed of 980 frames each in EER format] | Al‐Amoudi A, Baradaran R, Yuan X, Wú F, Naschberger A [Pubmed: 41476251] [DOI: 10.1038/s42003-025-09441-6] |
9.1 TB | 2.3 - 3.25 Å | |
| 2020-07-06 | Phase-plate cryo-EM of human TFIIH [multiple data sets in TIFF format] | Greber BJ, Toso DB, Fang J, Nogales E [Pubmed: 30860024] [DOI: 10.7554/eLife.44771] |
9.2 TB | 3.7 Å | |
| 2022-08-16 | Cryo-EM structure of the human GS-GN complex in the inhibited state [multiple data sets in EER and MRC formats] | Marr L, Biswas D, Daly LA, Browning C, Vial SCM, Maskell DP, Hudson C, Bertrand JA, Pollard J, Ranson NA, Khatter H, Eyers CE, Sakamoto K, Zeqiraj E [Pubmed: 35690592] [DOI: 10.1038/s41467-022-31109-6] |
9.2 TB | 2.62 Å | |
| 2025-03-21 | Unaligned cryo-EM micrographs of HCN4 channel bound to Ivabradine [31670 multi-frame micrographs composed of 40 frames each in TIFF format] | Saponaro A, Chaves-Sanjuan A, Sharifzadeh AS, Clarke OB, Marabelli C, Bolognesi M, Thiel G, Moroni A [Pubmed: 38917012] [DOI: 10.1073/pnas.2402259121] |
9.3 TB | 3.6 Å | |
| 2025-12-22 | Common beta cytokine complex micrographs [multiple data sets in TIFF format] | Caveney NA, Rodriguez GE, Pollmann C, Meyer T, Borowska MT, Wilson SC, Wang N, Xiang X, Householder KD, Tao P, Su LL, Saxton RA, Piehler J, Garcia KC [Pubmed: 38614096] [DOI: 10.1016/j.molcel.2024.03.023] |
9.3 TB | 3.6 - 3.8 Å | |
| 2025-07-10 | Cryo-EM SPA dataset of Streptococcus pneumoniae NADPH oxidase with NADPH under turnover conditions [22290 multi-frame micrographs composed of 1036 frames each in EER format] | Dubach VRA, San Segundo-Acosta P, Murphy BJ [Pubmed: 39039317] [DOI: 10.1038/s41594-024-01348-w] |
9.4 TB | 2.2 Å | |
| 2024-04-12 | Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III) [13536 multi-frame micrographs composed of 39 frames each in MRC format] | Rybak MY, Gagnon MG [Pubmed: 38538914] [DOI: 10.1038/s41594-024-01236-3] |
9.4 TB | 2.8 Å | |
| 2024-02-16 | Cryo-EM reconstruction of the influenza A virus helical ribonucleoprotein-like [26515 multi-frame micrographs composed of 40 frames each in TIFF format] | Chenavier F, Ruigrok RWH, Schoehn G, Ballandras-Colas A, Crépin T [Pubmed: 38100595] [DOI: 10.1126/sciadv.adj9974] |
9.5 TB | 5.3 - 8.7 Å | |
| 2025-05-13 | Micrographs of carvedilol-B1AR-arrestin2-V2Rpp complex [29650 multi-frame micrographs composed of 729 frames each in EER format] | Tatli M, Abiko LA, Petrovic I, Stahlberg H, Grzesiek S, Desai S, Spang A [Pubmed: 40372433] [DOI: 10.1073/pnas.2501487122] |
9.5 TB | 6.5 Å | |
| 2025-06-27 | Structure of the 55LCC ATPase complex [multiple data sets in EER and MRC formats] | Foglizzo M, Degtjarik O, Zeqiraj E [Pubmed: 38554706] [DOI: 10.1016/j.cell.2024.03.002] |
9.7 TB | 4.5 Å | |
| 2023-09-19 | Spraguea lophii 100S ribosome [multiple data sets in TIFF format] | McLaren MJ, Gil Diez P, Isupov M, Conners R, Gambelli L, Gold V, Connell S, Walter A, Williams B, Daum B [Pubmed: 37709902] [DOI: 10.1038/s41564-023-01469-w] |
9.8 TB | 2.79 Å | |
| 2022-06-17 | Cryo electron micrographs of Tetrahymena thermophila solubilized mitochondrial membrane complexes - Glacios data [multiple data sets in TIFF and MRC formats] | Letts JA, Zhou L, Guo F [Pubmed: 35357889] [DOI: 10.1126/science.abn7747] |
9.9 TB | 3.02 Å | |
| 2023-06-02 | f1-derived nanorods [25065 multi-frame micrographs composed of 40 frames each in TIFF format] | Conners R, McLaren MJ, Gold V [Pubmed: 37169795] [DOI: 10.1038/s41467-023-37915-w] |
9.9 TB | 2.58 - 2.97 Å | |
| 2024-04-17 | Cryo-EM of MERS 5' proximal stem-loop 5 [multiple data sets in MRC format] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
9.9 TB | 6.4 - 6.9 Å | |
| 2021-11-26 | Cryo electron microscopy of hIAPP fibrils seeded by patient-extracted fibrils [20390 multi-frame micrographs composed of 30 frames each in TIFF format] | Cao Q, Boyer DR, Sawaya MR, Abskharon R, Saelices L, Nguyen BA, Lu J, Murray KA, Kandeel F, Eisenberg DS [Pubmed: 34518699] [DOI: 10.1038/s41594-021-00646-x] |
9.9 TB | 3.8 - 4.1 Å | |
| 2025-10-09 | Single particle Cryo EM of the C-terminal half LRRK2 I2020T mutant bound to MLi-2 [10488 multi-frame micrographs composed of 50 frames each in EER format] | Sanz Murillo M, Villagran Suarez A, Dederer V, Chatterjee D, Alegrio Louro J, Knapp S, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
10.0 TB | 2.7 Å | |
| 2025-01-08 | Micrographs that led to the structure of Dia1 on F-actin [multiple data sets in TIFF format] | Palmer NJ, Barrie KR, Dominguez R [Pubmed: 38843827] [DOI: 10.1038/s41586-024-07637-0] |
10.0 TB | 3.41 - 3.51 Å | |
| 2018-09-10 | Cryo electron microscopy micrographs of yeast Exocyst complex [6472 multi-frame micrographs composed of 32 frames each in MRCS format] | Wang HW, Guo W, Li Y, Mei KR [Pubmed: 29335562] [DOI: 10.1038/s41594-017-0016-2] |
10.0 TB | 4.4 Å | |
| 2024-08-26 | Molecular model of a bacterial flagellar motor in situ reveals a “parts-list” of protein adaptations to increase torque [multiple data sets in MRC format] | Beeby M, Cohen EJ, Drobnič T, Nans A, Rosenthal PB [Pubmed: 40595286] [DOI: 10.1038/s41564-025-02012-9] |
10.1 TB | 7.9 - 9.36 Å | |
| 2025-12-08 | RNAP-TopoI complex on duplex scaffold [multiple data sets in TIFF and MRC formats] | Vidmar VV, Lamour VL, Weixlbaumer AW | 10.2 TB | 2.6 - 3.8 Å | |
| 2025-12-03 | GLIC in MSP1E3D1 nanodisc at pH 4.0 [14076 multi-frame micrographs composed of 1953 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
10.2 TB | 2.74 - 3.45 Å |