Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-03-20 |  |
Clostridium butyricum Argonaute catalytic mutant in ternary form (bound to guide DNA and target DNA) [14596 multi-frame micrographs composed of 50 frames each in EER format] | Barendse P, van Drimmelen M, Pacesa M, Sivaraman A, Zhang DK, Nickel L, Niault T, Lindhoud S, Roosjen M, Hegge JW, Park K, Correia BE, van der Oost J, Joo C, Westphal AH, Swarts DC | 4.7 TB | — |
| 2025-10-09 |  |
Sec7 regulatory domains scaffold autoinhibited and active conformations [4712 multi-frame micrographs composed of 129 frames each in TIFF format] | Brownfield BAB, Fromme JCF [Pubmed: 38416685] [DOI: 10.1073/pnas.2318615121] |
4.7 TB | 3.7 - 5.3 Å |
| 2025-07-23 |  |
The barley MLA13-AVRA13 heterodimer [multiple data sets in MRC format] | Lawson AW, Flores-Ibarra A, Gunkel M, Behrmann E, Schulze-Lefert P [Pubmed: 39948409] [DOI: 10.1038/s44318-025-00373-9] |
4.7 TB | 3.8 Å |
| 2026-05-19 |  |
Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - paranemic crossover triangle functionalized with a spike protein-binding aptamer (spike-PXT) origami device mixed with purified SARS-CoV-2 spike protein [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 4.7 TB | 2.78 - 6.92 Å |
| 2022-04-01 |  |
2.3 A structure of the ATP-dependent chromatin remodeler Chd1 bound to the nucleosome in a nucleotide-free state [multiple data sets in TIFF, MRC and MRCS formats] | Nodelman IM, Das S, Faustino AM, Fried SD, Bowman GD, Armache JP [Pubmed: 35173352] [DOI: 10.1038/s41594-021-00719-x] |
4.7 TB | 2.3 - 2.9 Å |
| 2026-04-20 |  |
Single-particle cryo-EM data of the high-affinity choline transporter in DDM with Na+ [18599 multi-frame micrographs composed of 60 frames each in TIFF format] | Vilchez-Garcia J, Jiang H, Lopez-Alonso JP, Ubarretxena-Belandia I, Tascon I | 4.7 TB | — |
| 2025-06-12 |  |
Cryo-EM structure of human MPC with pyruvate [13019 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang J, Feng L [Pubmed: 40044865] [DOI: 10.1038/s41586-025-08667-y] |
4.8 TB | 2.78 Å |
| 2023-12-01 |  |
cAMP-bound SpSLC9C1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
4.8 TB | 3.3 - 3.74 Å |
| 2022-11-15 |  |
2.1 Å resolution structure of β-galactosidase obtained from Glacios equipped with Falcon 3 [multiple data sets in TIFF format] | Merk A, Darling JE, Grisshammer R, Ognjenović J | 4.8 TB | 2.1 Å |
| 2020-06-19 |  |
Tetrameric SARS-CoV-2 ORF3a in a lipid nanodisc [7092 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Sorum B, Mali SS, Hoel CM, Sridharan S, Remis JP, Toso DB, Kotecha A, Bautista DM, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
4.8 TB | 6.5 Å |
| 2026-07-07 |  |
Transporter associated with antigen processing (TAP) EQ mutant bound to ATP [8950 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J [Pubmed: 40885191] [DOI: 10.1016/j.immuni.2025.08.003] |
4.8 TB | 3.1 - 3.7 Å |
| 2020-11-23 |  |
Cryo-EM of PAC1 receptor bound to PACAP38 and Gs protein [7649 multi-frame micrographs composed of 62 frames each in TIFF format] | Liang YL, Belousoff MJ, Zhao P, Koole C, Fletcher MM, Truong TT, Julita V, Christopoulos G, Xu HE, Zhang Y, Khoshouei M, Christopoulos A, Danev R, Sexton PM, Wootten D [Pubmed: 32004469] [DOI: 10.1016/j.molcel.2020.01.012] |
4.8 TB | 2.65 - 3.01 Å |
| 2019-04-12 |  |
Cryo-EM reconstruction of heparin-induced 2N3R tau filaments [multiple data sets in MRC and MRCS formats] | Zhang W., Falcon B., Murzin A.G., Fan J, Crowther R.A., Goedert M., Scheres S.H.W. [Pubmed: 30720432] [DOI: 10.7554/eLife.43584] |
4.8 TB | 3.7 Å |
| 2025-06-13 |  |
Cryo-EM structure of human MPC in complex with UK5099 in nanodiscs [12760 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang J, Feng L [Pubmed: 40044865] [DOI: 10.1038/s41586-025-08667-y] |
4.8 TB | 2.73 Å |
| 2025-12-22 |  |
Single particle cryoEM dataset of nucleosomes containing H2BK120ub [8392 multi-frame micrographs composed of 199 frames each in MRC format] | Hicks CW [Pubmed: 39149911] [DOI: 10.1093/nar/gkae698] |
4.8 TB | 3.32 - 3.36 Å |
| 2026-07-05 |  |
Raw images used to generate the structure of VPS13C in complex with calmodulin [ 0° tilt, 4140 multi-frame images and 25° tilt, 4914 multi-frame images each in TIFF format] [multiple data sets in TIFF format] | Li DL [Pubmed: 41292763] [DOI: 10.1101/2025.11.10.687702] |
4.8 TB | 3.8 - 4.2 Å |
| 2026-08-18 |  |
Single-particle cryo-EM datasets of H2A-nucleosome with scFv antibodies bound [5273 multi-frame micrographs composed of 40 frames each in EER format] | Tan DT | 4.8 TB | 3.9 Å |
| 2022-01-24 |  |
Cryo-EM structures of TTYH2 in the abscence of calcium [multiple data sets in TIFF format] | Li B, Hoel CM, Brohawn SG [Pubmed: 34824283] [DOI: 10.1038/s41467-021-27283-8] |
4.8 TB | 3.89 - 3.96 Å |
| 2026-04-09 |  |
Nanodisc-embedded human TF/FVIIa/XK1 [multiple data sets in TIFF and MRC formats] | Sedzro JC, Photenhauer AL, Ohi MD, Morrissey JH [Pubmed: 40811856] [DOI: 10.1182/blood.2025029430] |
4.8 TB | 6.0 Å |
| 2026-05-13 |  |
CryoEM reconstruction of coxsackievirus B1 virus-like particle with VP4 deletion [8020 multi-frame micrographs composed of 40 frames each in EER format] | Levanova AA, Ahmad KLL, Gurianov S, Butcher SJ [Pubmed: 41888844] [DOI: 10.1186/s12929-026-01229-y] |
4.9 TB | 2.7 Å |
| 2026-08-05 |  |
CryoEM movies of Mo-nitrogenase and FeSII from Azotobacter vinelandii in presence of oxygen [multiple data sets in EER and MRC formats] | Narehood SM, Cook BD, Srisantitham S, Eng VH, Shiau AA, McGuire KL, Britt RD, Herzik Jr MA, Tezcan FA [Pubmed: 39779844] [DOI: 10.1038/s41586-024-08311-1] |
4.9 TB | 2.27 - 3.94 Å |
| 2026-06-12 |  |
Engineered nanobody 1B2 bound to the acidic patch of the nucleosome [multiple data sets in TIFF and MRC formats] | Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK [DOI: 10.1093/nar/gkag693] |
4.9 TB | 3.17 Å |
| 2023-08-11 |  |
Cryo-EM micrographs of BP-ffsy filaments [20808 multi-frame micrographs composed of 40 frames each in TIFF format] | Guo J, Egelman EH, Xu B, Wang F [Pubmed: 37217766] [DOI: 10.1038/s41565-023-01401-7] |
4.9 TB | 3.1 - 3.2 Å |
| 2023-10-13 |  |
Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate [multiple data sets in TIFF format] | Rüttermann MR, Koci MK, Lill PL, Geladas EDG, Kaschani FK, Klink BUK, Erdmann RE, Gatsogiannis CG [Pubmed: 37741838] [DOI: 10.1038/s41467-023-41640-9] |
4.9 TB | 4.1 - 4.7 Å |
| 2026-04-26 |  |
Filament of D-TLKIVWR, a D-peptide that disaggregates Alzheimer's Paired Helical Filaments [10156 multi-frame micrographs composed of 40 frames each in TIFF format] | Hou K, Ge P, Zhang J, Lu J, Abskharon R, Yang S, Yu Z, Feigon J, Eisenberg DS, Sawaya MR, Lutter L, Dolinsky JL, Yang Y, Jiang YX, Boyer DR, Cheng X, Pi J [Pubmed: 40634605] [DOI: 10.1038/s41586-025-09244-z] |
4.9 TB | 3.7 Å |
