Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, access to some data files is currently unavailable.
The period will be extended due to a serious problem.
We apologize for any inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-12-13 |  |
Focused ion beam-scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag [1447 micrographs in TIFF format] | Steyer AM, Möbius W [Pubmed: 36354016] [DOI: 10.1002/glia.24290] |
34.6 GB | — |
| 2025-02-04 |  |
Cryo-electron tomographic investigation of native hippocampal glutamatergic synapses [multiple data sets in TIFF format] | Matsui A, Spangler CJ, Elferich J, Gouaux E [Pubmed: 39495821] [DOI: 10.7554/eLife.98458] |
9.5 GB | — |
| 2020-12-11 |  |
Cryo electron tomography after FIB-milling of Planctomycetes species Gemmata obscuriglobus (#1) [101 tilt series in MRC format] | Seeger C, Andersson SG [Pubmed: 32761170] [DOI: 10.1093/gbe/evaa159] |
2.7 GB | — |
| 2020-12-11 |  |
Cryo electron tomography after FIB-milling of Planctomycetes species Gemmata obscuriglobus (#2) [101 tilt series in MRC format] | Seeger C, Andersson SG [Pubmed: 32761170] [DOI: 10.1093/gbe/evaa159] |
2.7 GB | — |
| 2025-02-04 |  |
Microtubule plus end architecture in presence of the ciliary tip module. [34 tilt series in TIFF format] | Saunders H.A.J., Van den Berg C.M., Hoogebeen R.A., Schweizer D., Stecker K.E., Roepman R., Howes S.C., Akhmanova A. | 58.0 GB | — |
| 2026-02-24 |  |
CryoEM data of alpha-synuclein fibril with tetrazine 2.0 at site 60 [7815 micrographs in MRC format] | Jenkins RA, Rodriguez JA, Sawaya MR | 250.8 GB | — |
| 2018-07-05 |  |
Cryo-EM structure of alpha-synuclein fibrils [118 multi-frame micrographs composed of 50 frames each in MRC format] | Guerrero-Ferreira R, Taylor NM, Mona D, Ringler P, Lauer ME, Riek R, Britschgi M, Stahlberg H [Pubmed: 29969391] [DOI: 10.7554/elife.36402] |
6.3 GB | — |
| 2020-12-11 |  |
Cryo electron tomography after FIB-milling of Planctomycetes species Tuwongella immobilis (33k magnification) [multiple data sets in MRC format] | Seeger C, Andersson SG [Pubmed: 32761170] [DOI: 10.1093/gbe/evaa159] |
15.5 GB | — |
| 2022-12-13 |  |
Focused ion beam-scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag [940 micrographs in TIFF format] | Steyer AM, Möbius W [Pubmed: 36354016] [DOI: 10.1002/glia.24290] |
12.5 GB | — |
| 2025-04-07 |  |
Dynamic microtubule plus end architecture in presence of EB3. [51 tilt series in TIFF format] | Saunders H.A.J., Van den Berg C.M., Hoogebeen R.A., Schweizer D., Stecker K.E., Roepman R., Howes S.C., Akhmanova A. [Pubmed: 39856351] [DOI: 10.1038/s41594-025-01483-y] |
75.9 GB | — |
| 2022-12-13 |  |
Focused ion beam-scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag [1290 micrographs in TIFF format] | Steyer AM, Möbius W [Pubmed: 36354016] [DOI: 10.1002/glia.24290] |
22.4 GB | — |
| 2024-12-02 |  |
Interleaved scanning electron microscopy: exploring native samples at the mesoscale.Adult mouse brain [multiple data sets in TIFF and MRC formats] | Dumoux M | 344.8 GB | — |
| 2018-07-06 |  |
Single particle cryoEM of hemagglutinin with spot-to-plunge time of 500ms [multiple data sets in MRC format] | Noble AJ, Wei H, Dandey VP, Zhang Z, Potter CS, Carragher B [Pubmed: 30250056] [DOI: 10.1038/s41592-018-0139-3] |
51.1 GB | — |
| 2021-05-21 |  |
Tilt series of dividing vegetative and sporulating cells of Bacillus subtilis from the manuscript - Khanna et al., 2021 [multiple data sets in MRC format] | Khanna K, Lopez-Garrido J, Sugie J, Pogliano K, Villa E [Pubmed: 34018921] [DOI: 10.7554/eLife.62204] |
8.7 GB | — |
| 2025-12-17 |  |
Raw data for cryo-tomograms of Agrobacterium phage 7-7-1 and Agrobacterium sp. H13-3 [841 tilt series in MRC format] | Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A [Pubmed: 41353512] [DOI: 10.1038/s42003-025-09319-7] |
194.7 GB | — |
| 2022-03-14 |  |
SBF SEM of Human term placental villi [multiple data sets in TIFF format] | Lewis RM [DOI: 10.1101/2022.01.26.477815] |
90.2 GB | — |
| 2025-10-23 |  |
Raw micrographs of apoferritin specimen sprayed onto precooled grid coated in liquid ethane [466 multi-frame micrographs composed of 1998 frames each in EER format] | Gusach A, Russo CJ, Sader K [DOI: 10.1073/pnas.2516900122] |
332.0 GB | — |
| 2018-08-09 |  |
Three-dimensional nanostructure of an intact microglia cell [multiple data sets in TIFF and Other formats] | Bolasco G, Weinhard L, Boissonnet T, Neujahr R, Gross CT [DOI: 10.3389/fnana.2018.00105] |
7.4 GB | — |
| 2024-11-27 |  |
In situ cryo-electron tomography of the T. pseudonana diatom PyShell4 Ko and WT [multiple data sets in MRC, EER and TIFF formats] | Demulder M, Engel BD [Pubmed: 39368476] [DOI: 10.1016/j.cell.2024.09.025] |
146.5 GB | — |
| 2020-10-14 |  |
FIB SEM images of a Zebrafish hindbrain macrophage containing 2 Toxoplasma gondii tachizoites [multiple data sets in TIFF format] | Peddie CJ, Domart MC, Collinson L [Pubmed: 32461265] [DOI: 10.1242/dmm.043091] |
1.1 TB | — |
| 2025-06-11 |  |
Electron cryotomography of thin edges of U2OS cells using a 200 kV cryoTEM [1 tilt series in MRC format] | Szwedziak P [DOI: 10.1101/2024.12.06.627167] |
1.2 GB | — |
| 2020-12-09 |  |
TEM images of a Zebrafish hindbrain cells containing Toxoplasma gondii tachizoites [multiple data sets in TIFF format] | Domart MC, Collinson L [Pubmed: 32461265] [DOI: 10.1242/dmm.043091] |
3.4 GB | — |
| 2022-03-28 |  |
Representative data from Near-native state imaging by cryo-soft-X-ray tomography reveals remodelling of cytoplasmic vesicles and mitochondria during HSV-1 infection [14 reconstructed volumes in MRC format] | Nahas KLN, Connor VC, Scherer KM, Kaminski CF, Harkiolaki M, Crump CM, Graham SC [DOI: 10.1101/2021.10.11.463900] |
9.9 GB | — |
| 2025-06-11 |  |
Electron cryotomography of thin edges of U2OS cells using a 200 kV cryoTEM [1 tilt series in MRC format] | Szwedziak P [DOI: 10.1101/2024.12.06.627167] |
1.2 GB | — |
| 2021-01-22 |  |
SBF SEM images of a Zebrafish hindbrain macrophage containing 2 Toxoplasma gondii tachizoites [multiple data sets in DM4 format] | Peddie CJ, Domart MC, Collinson L [Pubmed: 32461265] [DOI: 10.1242/dmm.043091] |
16.5 GB | — |
