Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some datasets are currently inaccessible or incomplete (marked as Incomplete dataset).
We are pleased to report that the following entries have been restored:
EMPIAR-10577 (New)We are still accepting requests for datasets you would like us to download first (email, inquiry).
We apologize for the inconvenience and appreciate your understanding.
EMPIAR-PDBj services will be suspended during the following period for a legally required inspection of electrical equipment.
During this period, the website and data downloads from EMPIAR-PDBj will be unavailable.
Please use EMPIAR-EBI instead.
We apologize for any inconvenience.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-10-16 |  |
Cryo electron microscopy of large serine integrase and RDF complex during excisive pathway [3215 multi-frame micrographs composed of 54 frames each in TIFF format] | Rice PA, Olorunniji FJ, Shin H [Pubmed: 39803483] [DOI: 10.1101/2025.01.03.631226] |
690.0 GB | 3.31 - 7.1 Å |
| 2025-09-16 |  |
Rapid Hepatitis C Virus Replication Machinery Removal After Antiviral 1 Treatment with DAA Monitored By Multimodal Imaging [300 reconstructed volumes in TIFF format] | Castro V, Calvo G, Perez-Berna AJ, Mamprin K, Kapishnikov S, Rogers D, O'Connor S, Sheridan P, Fahy K, Pereiro E, Gastaminza P [Pubmed: 40553718] [DOI: 10.1016/j.str.2025.05.015] |
3.4 GB | — |
| 2025-10-30 |  |
Cryo-EM SPA dataset of the human nucleosome with the H2AX variant [multiple data sets in EER format] | Panigrahi R, Edwards RA, Glover JNM [Pubmed: 41123210] [DOI: 10.1093/nar/gkaf1028] |
5.7 TB | 3.4 - 4.1 Å |
| 2025-10-30 |  |
Cryo-EM SPA dataset of the human nucleosome with the γH2AX variant [multiple data sets in TIFF format] | Panigrahi R, Edwards RA, Glover JNM [Pubmed: 41123210] [DOI: 10.1093/nar/gkaf1028] |
5.1 TB | 3.1 - 3.7 Å |
| 2026-03-23 |  |
Single particle cryo-EM dataset of the 50S ribosomal subunit following ultrasonic excitation [4637 multi-frame micrographs composed of 50 frames each in TIFF format] | Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 41000704] [DOI: 10.1101/2025.09.14.676144] |
2.6 TB | 2.8 Å |
| 2026-03-23 |  |
Single particle cryo-EM dataset of the 50S ribosomal subunit jetted control sample [2434 multi-frame micrographs composed of 50 frames each in TIFF format] | Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 41000704] [DOI: 10.1101/2025.09.14.676144] |
1.4 TB | 2.8 Å |
| 2026-03-23 |  |
Single particle cryo-EM dataset of influenza hemagglutinin (A/Hong Kong/1/1968, H3N2) following ultrasonic excitation [7000 multi-frame micrographs composed of 50 frames each in TIFF format] | Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 41000704] [DOI: 10.1101/2025.09.14.676144] |
4.1 TB | 2.7 Å |
| 2026-03-24 |  |
Single particle cryo-EM dataset of influenza hemagglutinin (A/Hong Kong/1/1968, H3N2) jetted control sample [4882 multi-frame micrographs composed of 50 frames each in TIFF format] | Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 41000704] [DOI: 10.1101/2025.09.14.676144] |
2.8 TB | 2.7 Å |
| 2026-03-23 |  |
Single particle cryo-EM dataset of human C-reactive protein following ultrasonic excitation [10602 multi-frame micrographs composed of 50 frames each in TIFF format] | Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 41000704] [DOI: 10.1101/2025.09.14.676144] |
6.4 TB | 3.2 - 3.7 Å |
| 2026-03-23 |  |
Single particle cryo-EM dataset of human C-reactive protein jetted control sample [12000 multi-frame micrographs composed of 50 frames each in TIFF format] | Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 41000704] [DOI: 10.1101/2025.09.14.676144] |
6.8 TB | 3.3 - 4.3 Å |
| 2026-04-13 |  |
Synchrotron radiation micro-computed tomography of the small-spotted catshark embryonic development (Chondrichthyes: Scyliorhinus canicula) [1 reconstructed volumes in TIFF format] | Escamilla-Vega E, Koch AK, Seton LWG, Murillo-Rincón AP, Kyomen S, Hammel JU, Moritz T, Kaucká M | 4.7 TB | — |
| 2026-01-29 |  |
cryoTEM dataset of AAV2 Rep40 + AAV8 capsid + ATPyS [17295 multi-frame micrographs composed of 40 frames each in TIFF format] | Rouse SLR, Bubeck DB, Barritt JB, Xu VX [Pubmed: 41790558] [DOI: 10.1016/j.celrep.2026.117044] |
2.5 TB | 1.88 - 2.19 Å |
| 2025-10-13 |  |
Cryo electron [21252 multi-frame micrographs composed of 60 frames each in EER format] | Ramírez-Larrota JS, Juyoux P, Guerra P, Eckhard U, Gomis-Rüth FX [Pubmed: 40627637] [DOI: 10.1371/journal.ppat.1013292] |
11.3 TB | 2.81 Å |
| 2026-01-16 |  |
Continuum architecture dynamics of vesicle tethering in exocytosis [multiple data sets in MRC format] | Marta Puig-Tintó MPT, Sebastian Ortiz SO, Sasha Meek SM, Raffaele Coray RC, Altair C. Hernández ACH, Anna Castellet AC, Laura I. Betancur LIB, Philipp Hoess PH, Markus Mund MM, Mercè Izquierdo Serra MIS, Baldo Oliva BO, Andrés Molina Ribagorda AMR, Alex de Marco AM, Jonas Ries JR, Daniel Castaño Díez DCD, Carlo Manzo CM, Oriol Gallego OG [Pubmed: 41547355] [DOI: 10.1016/j.cell.2025.11.038] |
1.8 TB | — |
| 2025-10-15 |  |
Human iPSC-Derived Lens Organoids Recapitulate Lens Development and Morphogenesis In Vitro [495 micrographs in TIFF format] | Harrington J, Young RD, Li X, Hayashi R, Regini JW, Quantock AJ, Pierscionek B, Nishida K | 64.5 GB | — |
| 2026-05-01 |  |
Single-particle cryo-EM dataset of H. neapolitanus CsoSCA in oxidizing conditions (active) [multiple data sets in TIFF and MRC formats] | Gaullier G, Vogiatzi N, Blikstad C [DOI: 10.64898/2026.04.02.716132] |
1.3 TB | 2.13 - 2.45 Å |
| 2026-05-01 |  |
Single-particle cryo-EM dataset of H. neapolitanus CsoSCA in reducing conditions (inactive) [multiple data sets in TIFF and MRC formats] | Gaullier G, Vogiatzi N, Blikstad C [DOI: 10.64898/2026.04.02.716132] |
1.3 TB | 2.06 - 2.27 Å |
| 2026-05-01 |  |
Single-particle cryo-EM dataset of H. neapolitanus CsoSCA C283A/C284A inactive mutant [multiple data sets in TIFF and MRC formats] | Gaullier G, Vogiatzi N, Blikstad C [DOI: 10.64898/2026.04.02.716132] |
1.7 TB | 2.08 - 2.22 Å |
| 2025-10-30 |  |
Cryo-EM structure of R-eLACCO2 in the lactate-bound state [8250 multi-frame micrographs composed of 48 frames each in TIFF format] | Kamijo Y, Kusakizako T, Nureki O, Nasu Y [Pubmed: N/A] [DOI: 10.1038/s41467-025-64484-x] |
1.7 TB | 2.7 Å |
| 2026-03-01 |  |
Human TRPM4 ion channel in MSP2N2 lipid nanodisc in a calcium-bound state [7945 multi-frame micrographs composed of 40 frames each in EER format] | Pugh CF, Feilen LP, Živković D, Præstegaard KF, Sideris C, Borthwick NJ, de Lichtenberg C, Bolla JR, Autzen AAA, Autzen HE [Pubmed: 41372170] [DOI: 10.1038/s41467-025-66208-7] |
3.8 TB | 3.8 Å |
| 2025-12-01 |  |
Human VDAC1 in cMSP1D1 circularized nanodiscs, monomeric form. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
2.2 TB | 7.21 Å |
| 2025-11-18 |  |
Cryo Electron Microscopy of hIAPP A25P, S28P and S29P mutants [multiple data sets in TIFF and EER formats] | Ooi SA, Valli D, Maj M [Pubmed: 40850490] [DOI: 10.1016/j.jmb.2025.169405] |
16.2 TB | 3.0 - 4.07 Å |
| 2025-12-17 |  |
Electron tomography of mitochondria from adult and aged mice hearts [multiple data sets in TIFF format] | Barrientos G, Molina-Riquelme I, Breitsprecher L, Busch KB, Eisner V [Pubmed: 41468425] [DOI: 10.1073/pnas.2508911123] |
523.1 MB | — |
| 2025-11-30 |  |
Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex A [3636 multi-frame micrographs composed of 1512 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.8 TB | 2.97 Å |
| 2025-11-18 |  |
Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex B [3274 multi-frame micrographs composed of 1519 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.6 TB | 3.23 Å |
