Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W [7420 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.7 TB | 3.13 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W with calcium [7490 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.6 TB | 3.29 - 3.52 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W with ARM210 [6488 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.4 TB | 3.08 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W with calcium and calmodulin [10334 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
2.3 TB | 3.12 - 3.56 Å |
| 2025-12-07 |  |
SpCas9 with computationally designed SpCas9_b3 binder [15502 multi-frame micrographs composed of 40 frames each in MRC format] | Pacesa M, Nickel L, Correia BE [Pubmed: 39677777] [DOI: 10.1101/2024.09.30.615802] |
6.2 TB | 3.3 Å |
| 2026-02-17 |  |
Single Particle cryo-EM dataset of ATPγS-bound Redondovirus Rep [5605 multi-frame micrographs composed of 35 frames each in TIFF format] | Montermoso S, Gupta K, Bushman FD, Van Duyne GD | 1.7 TB | — |
| 2026-03-02 |  |
CryoEM dataset of M. mazei topoisomerase VI-minicircle DNA complex [50906 multi-frame micrographs composed of 0 frames each in EER format] | Richman DE, Berger JM [Pubmed: 41698922] [DOI: 10.1038/s41467-026-69491-0] |
29.6 TB | 3.6 - 4.0 Å |
| 2026-02-17 |  |
Single Particle cryo-EM dataset of ADP-bound Redondovirus Rep [3790 multi-frame micrographs composed of 35 frames each in TIFF format] | Montermoso S, Gupta K, Bushman FD, Van Duyne GD | 1.2 TB | — |
| 2025-11-14 |  |
Cryo-tomography of 1.4 nm-HAN-594 labeled nucleosomes inside cells (ExoSloNano) [41 tilt series in TIFF format] | Young LN, Sherard A, Narasimhan M, Flaherty WA, Bennett E, Rosen MK, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M | 6.5 GB | — |
| 2025-11-14 |  |
Cryo-tomography of 1.4 nm-HAN-488 labeled ribosomes inside cells (ExoSloNano) [49 tilt series in TIFF format] | Young LN, Sherard A, Bennett E, Rosen MK, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Flaherty WA | 28.1 GB | — |
| 2025-12-07 |  |
Single particle Cryo-EM structure of the Pdr5 drug resistance transporter [multiple data sets in TIFF format] | Harris A, Wagner M, Du D, Raschka S, Nentwig LM, Gohlke H, Smits SHJ, Luisi BF, Schmitt L [Pubmed: 34489436] [DOI: 10.1038/s41467-021-25574-8] |
3.8 TB | 2.85 - 3.77 Å |
| 2026-03-04 |  |
CryoEM dataset of M. mazei topoisomerase VI(A:E342Q)-minicircle DNA complex [26728 multi-frame micrographs composed of 1233 frames each in EER format] | Richman DE, Berger JM [Pubmed: 41698922] [DOI: 10.1038/s41467-026-69491-0] |
14.1 TB | 2.5 - 2.7 Å |
| 2025-12-17 |  |
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling [multiple data sets in EER format] | Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E, Kim J, Roseborough A, Nyman M [Pubmed: 41284882] [DOI: 10.1073/pnas.2524034122] |
18.4 GB | — |
| 2025-11-04 |  |
Single-particle cryo-electron microscopy of the Cas1-2/3 heterohexamer [3293 multi-frame micrographs composed of 40 frames each in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
765.6 GB | 3.5 Å |
| 2025-11-04 |  |
Cas1-Cas2/3 heterohexamer bound to foreign dsDNA fragment [2511 multi-frame micrographs composed of 40 frames each in MRC format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
1.7 TB | 3.31 Å |
| 2025-11-14 |  |
Cryo-tomography of purified1.4 nm-HAN-488 labeled ribosomes from intact cells for validation of labeling method (ExoSloNano) [37 tilt series in TIFF format] | Young LN, Sherard A, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Flaherty WA, Bennett E, Rosen MK | 168.9 GB | — |
| 2025-11-14 |  |
Cryo-tomography of 5 nm Nanogold labeled ribosomes from intact cells (ExoSloNano) [37 tilt series in TIFF format] | Young LN, Sherard A, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Riggi M, Flaherty WA, Rosen MK, Giraldez AJ, Villa E [DOI: 10.1101/2024.10.12.617288] |
41.6 GB | — |
| 2025-11-19 |  |
Structure of the RhGB07 Prefusion, Closed-state trimeric spike protein [7842 multi-frame micrographs composed of 1 frames each in MRC format] | Ni D, Lau K, Ekundayo B [DOI: 10.1101/2025.09.03.673949] |
490.1 GB | 2.97 Å |
| 2025-11-05 |  |
Cas1-2/3 integration complex, 32 bp foreign DNA without PAM, CRISPR leader-repeat-spacer DNA fragment [multiple data sets in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
6.1 TB | 3.8 - 3.9 Å |
| 2025-12-08 |  |
Complex between human carboxyhemoglobin and Staphylococcus aureus hemophore IsdH [1 micrographs - focal pairs - unprocessed in TIFF format] | Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S [DOI: 10.1016/j.yjsbx.2025.100138] |
1.5 TB | 3.1 - 4.5 Å |
| 2025-11-04 |  |
Cas1-2/3 integration complex, 34 bp foreign DNA with PAM, CRISPR leader-repeat-spacer DNA fragment [multiple data sets in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
9.1 TB | 4.0 Å |
| 2026-01-11 |  |
Single particle micrographs of S.cerevisiae stalled ribosomes in complex with Ssb during in-vitro translation [56352 micrographs in MRC format] | Grundmann L | 3.4 TB | 2.9 - 3.0 Å |
| 2025-10-14 |  |
CryoET raw tilt series from lysosomes immunopurified via TRPML1-mNeonGreen-1D4 [multiple data sets in TIFF format] | De Jesús-Pérez JJ, Mcveigh B, Mihelc EM, Moiseenkova-Bell V.Y. | 1.2 TB | 13.8 - 26.6 Å |
| 2025-09-11 |  |
Single particle structure of mCELSR1 extracellular region containing CADH9-GAIN domains [11377 multi-frame micrographs composed of 50 frames each in TIFF format] | Bandekar SJ, Arac D [Pubmed: 40295529] [DOI: 10.1038/s41467-025-59319-8] |
6.0 TB | 4.3 Å |
| 2025-08-29 |  |
Benchmarking Talos Arctica with K3 and Biocontinuum energy filter [1483 multi-frame micrographs composed of 50 frames each in TIFF format] | Maruthi K, Morais M | 334.9 GB | 1.88 Å |
