Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-07 | Single particle cryoEM structure of Latrophilin-3 (ADGRL3) HormR and GAIN domains in the context of the holoreceptor [6976 multi-frame micrographs composed of 58 frames each in TIFF format] | Kordon SP, Bandekar SJ, Arac D [Pubmed: 39627215] [DOI: 10.1038/s41467-024-54836-4] |
5.8 TB | 3.9 Å | |
| 2021-03-26 | GluK2/K5 with 6-Cyano-7-nitroquinoxaline-2,3-dione (CNQX) [multiple data sets in TIFF and MRCS formats] | Khanra NK, Meyerson JRM [Pubmed: 33724189] [DOI: 10.7554/eLife.66097] |
5.9 TB | 5.3 Å | |
| 2024-07-14 | CryoEM micrographs of a group II RNP in the post-ligation state [multiple data sets in TIFF format] | Xu L, Liu T, Chung K [Pubmed: 37993708] [DOI: 10.1038/s41586-023-06746-6] |
5.9 TB | 3.0 Å | |
| 2025-07-25 | Single Particle cryo-EM dataset of the revitrified HIV-1 envelope protein [10528 multi-frame micrographs composed of 1287 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
5.9 TB | 3.8 Å | |
| 2025-03-20 | Cryo electron micrographs of Plastid-encoded RNA polymerase transcription elongation complex (PEP-TEC) from Sinapis alba [33330 multi-frame micrographs composed of 40 frames each in TIFF format] | Webster MW [Pubmed: 38428394] [DOI: 10.1016/j.cell.2024.01.036] |
5.9 TB | 2.62 - 5.0 Å | |
| 2025-01-17 | CryoEM of E. coli RNA polymerase and lambda PR promoter DNA 500 ms after mixing (8 mM CHAPSO) [27923 multi-frame micrographs composed of 50 frames each in TIFF format] | Saecker RM, Mueller AU, Malone B, Chen J, Budell WC, Dandey VP, Maruthi K, Mendez JH, Molina N, Eng ET, Yen LY, Potter CS, Carragher B, Darst SA [Pubmed: 38951624] [DOI: 10.1038/s41594-024-01349-9] |
5.9 TB | 2.8 - 2.9 Å | |
| 2025-06-02 | Single-particle cryo-EM dataset of the glycosyltransferase ArnC from Salmonella enterica in the apo state from Krios microscope [multiple data sets in TIFF and MRC formats] | Ashraf KU, Punetha A, Kaelber JT, Petrou VI [Pubmed: 39974898] [DOI: 10.1101/2025.01.29.634835] |
5.9 TB | 2.74 Å | |
| 2026-03-10 | Extended conformation of dusk state KaiC [15001 multi-frame micrographs composed of 50 frames each in TIFF format] | Dzimianski JV, Crosby P, Balasco Serrao VH, Partch CL | 5.9 TB | 2.59 Å | |
| 2024-06-06 | Cryo-EM structure of yeast SWR1C subunit Swc5 bound to the nucleosome [multiple data sets in TIFF and MRC formats] | Eek P, Song T [Pubmed: 38809771] [DOI: 10.7554/eLife.94869] |
5.9 TB | 3.1 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of plunge-frozen GroEL [9759 multi-frame micrographs composed of 1206 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 5.9 TB | 1.9 Å | |
| 2023-04-11 | Human PRPH2-ROM1 oligomers [multiple data sets in TIFF format] | El Mazouni D [Pubmed: 36351012] [DOI: 10.1126/sciadv.add3677] |
6.0 TB | 7.6 - 8.2 Å | |
| 2025-09-11 | Single particle structure of mCELSR1 extracellular region containing CADH9-GAIN domains [11377 multi-frame micrographs composed of 50 frames each in TIFF format] | Bandekar SJ, Arac D [Pubmed: 40295529] [DOI: 10.1038/s41467-025-59319-8] |
6.0 TB | 4.3 Å | |
| 2025-11-06 | Single particle cryoEM data of Mycobacterium smegmatis EtfD [11952 multi-frame micrographs composed of 30 frames each in EER format] | Courbon GM, Rubinstein JL [Pubmed: 40462971] [DOI: 10.1101/2025.05.14.654035] |
6.0 TB | 3.2 Å | |
| 2025-06-19 | ATP-Dependent Diazotase, CmaA6 [7963 multi-frame micrographs composed of 158 frames each in EER format] | Kawai S, Karasawa M, Moriwaki Y, Terada T, Katsuyama Y, Ohnishi Y [Pubmed: 40275441] [DOI: 10.1002/anie.202505851] |
6.0 TB | 3.48 Å | |
| 2025-12-19 | Cryo-EM structure of the prostaglandin D2 receptor 1 (DP1) complex in inactive and active states [multiple data sets in MRC and TIFF formats] | Davoudinasab B, Raskovalov A, Lee W, Kim D, Kim H, Lam JH, Han GW, Katritch V, Cherezov V [Pubmed: 41062467] [DOI: 10.1038/s41467-025-64002-z] |
6.0 TB | 2.45 - 2.89 Å | |
| 2023-07-25 | Cryo-EM structure of the human Sirtuin 6-nucleosome complex [11872 multi-frame micrographs composed of 40 frames each in TIFF format] | Chio US, Rechiche O, Bryll AR, Zhu J, Leith EM, Feldman JL, Peterson CL, Tan S, Armache JP [Pubmed: 37058572] [DOI: 10.1126/sciadv.adf7586] |
6.0 TB | 3.07 Å | |
| 2020-10-16 | Structure of human Frizzled5 by fiducial-assisted cryo-EM [10922 multi-frame micrographs composed of 50 frames each in TIFF format] | Tsutsumi N, Gati C, Garcia KC [Pubmed: 32762848] [DOI: 10.7554/eLife.58464] |
6.0 TB | 3.7 Å | |
| 2021-03-05 | Movies of a heptameric light-harvesting 2 complex from the marine purple bacterium Mch. purpuratum [9543 multi-frame micrographs composed of 42 frames each in MRCS format] | Gardiner AT, Naydenova K, Castro-Hartmann P, Nguyen-Phan TC, Russo CJ, Sader K, Hunter CN, Cogdell RJ, Qian P [Pubmed: 33579696] [DOI: 10.1126/sciadv.abe4650] |
6.0 TB | 2.38 Å | |
| 2025-11-05 | Cas1-2/3 integration complex, 32 bp foreign DNA without PAM, CRISPR leader-repeat-spacer DNA fragment [multiple data sets in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
6.1 TB | 3.8 - 3.9 Å | |
| 2025-01-17 | CryoEM of E. coli RNA polymerase and lambda PR promoter DNA 120 ms after mixing [multiple data sets in TIFF format] | Saecker RM, Mueller AU, Malone B, Chen J, Budell WC, Dandey VP, Maruthi K, Mendez JH, Molina N, Eng ET, Yen LY, Potter CS, Carragher B, Darst SA [Pubmed: 38951624] [DOI: 10.1038/s41594-024-01349-9] |
6.1 TB | 2.8 - 2.9 Å | |
| 2025-06-13 | Cryo-EM structure of human MPC in complex with AKOS005153046 [16536 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang J, Feng L [Pubmed: 40044865] [DOI: 10.1038/s41586-025-08667-y] |
6.1 TB | 2.83 Å | |
| 2024-04-17 | Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes [16285 multi-frame micrographs composed of 1176 frames each in EER format] | Sauer PV, Kotecha A, Koh AF [Pubmed: 38578996] [DOI: 10.1126/sciadv.adk7535] |
6.1 TB | 1.63 - 2.2 Å | |
| 2022-02-07 | Cryo electron microscopy SMARCAD1 with nucleosome in ADP-BeF3 bound state [11235 multi-frame micrographs composed of 60 frames each in TIFF format] | Markert JW, Luger K [Pubmed: 34652950] [DOI: 10.1126/sciadv.abk2380] |
6.2 TB | 6.49 Å | |
| 2023-04-11 | Sarecycline inhibits protein translation in Cutibacterium acnes 70S ribosome using a two-site mechanism [multiple data sets in TIFF and MRC formats] | Lomakin IB, Devarkar SC, Patel S, Grada A, Bunick CG [Pubmed: 36864821] [DOI: 10.1093/nar/gkad103] |
6.2 TB | 2.78 Å | |
| 2025-06-02 | Cryo-EM micrographs for the DRT2 reverse transcriptase / ncRNA complex in resting and elongating states [multiple data sets in TIFF format] | Wilkinson ME, Li D, Gao A, Macrae RK, Zhang F [Pubmed: 39208082] [DOI: 10.1126/science.adq3977] |
6.2 TB | 2.91 - 3.17 Å |