Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-07-19 | Movies of two different filaments (AAP and threads) from Sulfolobus acidocaldarius [6279 multi-frame micrographs composed of 40 frames each in TIFF format] | Gaines M, Isupov MN, Sivabalasarma S, Haque RU, McLaren M, Mollat CL, Tripp P, Neuhaus A, Gold VAM, Albers SV, Daum B [Pubmed: 38877033] [DOI: 10.1038/s41467-024-45831-w] |
5.6 TB | 3.22 - 3.46 Å | |
| 2022-12-05 | CryoEM micrographs of a group II intron retroelement in complex with its structured DNA target (holoRNP) [multiple data sets in TIFF format] | Chung KC, Xu LX, Pyle AMP [Pubmed: 36356138] [DOI: 10.1126/science.abq2844] |
5.6 TB | 2.8 Å | |
| 2024-07-03 | Single particle cryo-EM dataset of as-prepared Bos taurus mitochondrial complex I (originally purified in LMNG) proteoliposomes [27014 multi-frame micrographs composed of 40 frames each in TIFF format] | Grba DN, Wright JJ, Fisher W, Yin Z, Hirst J [Pubmed: 38870289] [DOI: 10.1126/science.ado2075] |
5.6 TB | 2.5 - 2.9 Å | |
| 2025-07-25 | movies for NKCC1 bound with torsemide [12824 multi-frame micrographs composed of 50 frames each in TIFF format] | Cao E [Pubmed: 39875725] [DOI: 10.1038/s44318-025-00368-6] |
5.6 TB | 2.6 Å | |
| 2025-06-28 | Multiple steps of dynein activation by Lis1 visualized by cryo-EM [multiple data sets in EER format] | Kendrick AA, Nguyen KHV, Ma W, Karasmanis EP, Amaro RE, Reck-Peterson SL, Leschziner AE [Pubmed: 40410592] [DOI: 10.1038/s41594-025-01558-w] |
5.6 TB | 3.0 - 3.7 Å | |
| 2024-07-14 | Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL [16306 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [Pubmed: 38805290] [DOI: 10.1073/pnas.2320879121] |
5.6 TB | 3.8 Å | |
| 2021-10-26 | CryoEM image reconstuction of the envelope protein of endogenous retrovirus Y032 from the human hookworm Ancylostoma ceylanicum [3027 multi-frame micrographs composed of 36 frames each in MRC format] | Mata CP, Merchant M, Modis Y [Pubmed: 35544562] [DOI: 10.1126/sciadv.abj6894] |
5.6 TB | 3.76 Å | |
| 2022-12-12 | E.coli RNaseP Holoenzyme with Mg2+ [14025 multi-frame micrographs composed of 40 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
5.6 TB | 3.1 Å | |
| 2023-04-11 | Desulfonema ishimotonii Cas7-11 in complex with Csx29 and Csx30 [multiple data sets in TIFF format] | Strecker J, Demircioglu FE, Li D, Faure G, Wilkinson ME, Macrae RK, Zhang F [Pubmed: 36423276] [DOI: 10.1126/science.add7450] |
5.7 TB | 2.53 - 3.15 Å | |
| 2026-04-13 | Raw and motion corrected micrographs for Cryo-EM structure of rat TRPM1 in the apo state [multiple data sets in MRC format] | Fabrizio MF, Zhao CZ [Pubmed: 41857038] [DOI: 10.1038/s41467-026-70722-7] |
5.7 TB | 4.3 Å | |
| 2025-10-30 | Cryo-EM SPA dataset of the human nucleosome with the H2AX variant [multiple data sets in EER format] | Panigrahi R, Edwards RA, Glover JNM [Pubmed: 41123210] [DOI: 10.1093/nar/gkaf1028] |
5.7 TB | 3.4 - 4.1 Å | |
| 2025-06-27 | Cryo-EM structures of TUG-1375/4-CMTB-bound active FFA2 and GLPG0974-bound inactive FFA2 [multiple data sets in TIFF format] | Kugawa M, Kawakami K, Kise R, Suomivuori CM, Tsujimura M, Kobayashi K, Kojima A, Inoue WJ, Fukuda M, Matsui TE, Fukunaga A, Kobayashi J, Kim S, Ikeda H, Yamashita K, Saito K, Ishikita H, Dror RO, Inoue A, Kato HE [Pubmed: 40140663] [DOI: 10.1038/s41467-025-57983-4] |
5.7 TB | 3.19 - 3.36 Å | |
| 2023-02-27 | CryoEM micrographs of mouse apoferritin in a range of ice thicknesses on different microscope setups [multiple data sets in MRC and TIFF formats] | Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD [Pubmed: 36742017] [DOI: 10.1016/j.yjsbx.2023.100085] |
5.7 TB | 2.36 - 10.18 Å | |
| 2018-08-08 | Sub-2 Å Single-Particle Cryo-EM Reconstruction of AAV2-L336C [multiple data sets in MRC and MRCS formats] | Tan YZ, Aiyer S, Mietzsch M, Hull JA, McKenna R, Grieger J, Samulski RJ, Baker TS, Agbandje-McKenna M, Lyumkis D [Pubmed: 30194371] [DOI: 10.1038/s41467-018-06076-6] |
5.7 TB | 1.86 Å | |
| 2023-02-13 | Cryo-EM snapshots of Eukaryotic Membrane Proteins in Native Lipid-Bilayer Nanodiscs [multiple data sets in MRC format] | Janson K, Kyrilis FL, Tueting C, Hamdi F, Kastritis PL [Pubmed: 36399657] [DOI: 10.1021/acs.biomac.2c00935] |
5.7 TB | 4.73 - 18.59 Å | |
| 2023-09-12 | Single Particle cryoEM dataset of Type I-F CRISPR integration complex from Pseudomonas aeruginosa [9875 multi-frame micrographs composed of 50 frames each in TIFF format] | Santiago-Frangos A, Henriques WS, Wiegand T, Gauvin CC, Buyukyoruk M, Graham AB, Wilkinson RA, Triem L, Neselu K, Eng ET, Lander GC, Wiedenheft B [Pubmed: 37710013] [DOI: 10.1038/s41594-023-01097-2] |
5.7 TB | 3.48 Å | |
| 2023-08-18 | Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 3) [36507 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
5.7 TB | 2.39 Å | |
| 2022-01-18 | Single-particle cryoEM data of yeast Ubr1-Ubc2-Ub-N-degron complex (initiation) [10932 multi-frame micrographs composed of 40 frames each in TIFF format] | Pan M, Zhao M [Pubmed: 34789879] [DOI: 10.1038/s41586-021-04097-8] |
5.7 TB | 3.35 Å | |
| 2024-01-05 | The Noc1-Noc2 RNP - a co-transcriptional large ribosomal assembly intermediate [multiple data sets in TIFF format] | Sanghai ZA, Piwowarczyk R, Vanden Broeck A, Klinge S [Pubmed: 37037974] [DOI: 10.1038/s41594-023-00947-3] |
5.7 TB | 4.0 Å | |
| 2020-11-23 | CryoEM structure of EPYC1(106-135) peptide-bound Rubisco [13727 multi-frame micrographs composed of 60 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
5.8 TB | 2.06 Å | |
| 2025-07-10 | Motion corrected micrographs [32306 multi-frame micrographs composed of 30 frames each in MRCS format] | Arni Thorlacius AT, Maksim Rulev MR, Oscar Sundberg OS, Anna Sundborger-Lunna ASL [Pubmed: 39910321] [DOI: 10.1038/s42003-025-07610-1] |
5.8 TB | 3.45 - 3.88 Å | |
| 2025-02-21 | Single particle cryoEM dataset of Haspin kinase bound to a nucleosome [9999 multi-frame micrographs composed of 1485 frames each in EER format] | Hicks CW, Wolberger C [Pubmed: 39979508] [DOI: 10.1038/s41594-025-01502-y] |
5.8 TB | 2.99 - 3.64 Å | |
| 2022-06-17 | The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Lumacaftor (VX-809) [7650 multi-frame micrographs composed of 60 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
5.8 TB | 2.7 Å | |
| 2024-03-17 | Cryo-EM of HCoV-NL63 5' proximal stem-loop 5 [multiple data sets in MRC format] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38076883] [DOI: 10.1101/2023.11.22.567964] |
5.8 TB | 8.4 - 9.0 Å | |
| 2024-03-26 | Cryo electron microscopy of Virus-like Particle based on PVY coat protein with dC40 deletion [6215 multi-frame micrographs composed of 40 frames each in TIFF format] | Kavcic L, Kezar A [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
5.8 TB | 3.09 - 3.5 Å |