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The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-01-11 | Electron cryomicroscopy of NSF, the binary SNARE complex of SNAP-25 and syntaxin-1a, and alpha-SNAP under non-hydrolyzing conditions [multiple data sets in TIFF and MRC formats] | White KI, Brunger AT [Pubmed: 40993127] [DOI: 10.1038/s41467-025-62764-0] |
14.6 TB | 2.95 - 4.01 Å | |
| 2026-01-11 | Cryo-EM micrographs of the symmetric sheathed filament of the ΔflaA1/A2 mutant in Leptospira biflexa [2318 multi-frame micrographs composed of 109 frames each in TIFF format] | Kawamoto A, Nakamura S, Koizumi N | 4.4 TB | 2.3 - 2.4 Å | |
| 2026-01-11 | Single-particle cryo-EM data of the ternary complex of ReChb - crRNA - target dsDNA [43778 multi-frame micrographs composed of 50 frames each in TIFF format] | Tascon I, Lopez-Alonso JP, Ubarretxena-Belandia I [Pubmed: 39482449] [DOI: 10.1038/s41587-024-02461-3] |
13.1 TB | 3.14 Å | |
| 2026-01-07 | Yeast 80S ribosome (ncs2 elp6 -/-) dataset 1/2 [9486 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 41429421] [DOI: 10.1101/2024.02.27.582385] |
3.6 TB | 1.81 - 3.0 Å | |
| 2026-01-07 | Yeast 80S ribosome (ncs2 elp6 -/-) dataset 2/2 [8583 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 41429421] [DOI: 10.1101/2024.02.27.582385] |
3.2 TB | 1.81 - 3.0 Å | |
| 2026-01-07 | Yeast 80S ribosome (wild type) dataset 1/2 [8595 multi-frame micrographs composed of 40 frames each in TIFF format] | Glatt S, Koziej L [Pubmed: 41429421] [DOI: 10.1101/2024.02.27.582385] |
3.2 TB | 1.81 - 3.0 Å | |
| 2026-01-07 | Electron cryomicroscopy of NSF, the minimal binary SNARE complex of SNAP-25 and syntaxin-1a, and alpha-SNAP under non-hydrolyzing conditions [multiple data sets in TIFF and MRC formats] | White KI, Brunger AT [Pubmed: 40993127] [DOI: 10.1038/s41467-025-62764-0] |
8.6 TB | 3.09 - 3.58 Å | |
| 2026-01-05 | Cryo-electron tomography of neuronal synapses, Munc13-SNAP25 project [multiple data sets in MRCS and MRC formats] | Papantoniou C, Lučić V, Orozco-Borunda DH [Pubmed: 37343100] [DOI: 10.1126/sciadv.adf6222] |
263.4 GB | 31.2 - 35.1 Å | |
| 2026-01-05 | Single particle cryo-EM dataset of cardiac immunoglobulin lambda-6 light-chain AL-224L [10309 multi-frame micrographs composed of 936 frames each in EER format] | Hicks CW, Gursky O, Huda N [Pubmed: 41389958] [DOI: 10.1016/j.jmb.2025.169591] |
4.4 TB | 2.92 Å | |
| 2025-12-24 | Cryogenic transmission electron microscopy images of extracellular vesicles isolated from conditioned media of pancreatic cancer and normal pancreatic epithelial cell lines [3 micrographs in TIFF format] | Singh BS, Gaur PG, Bose PB, Zhang YJ, Li YL, Zhang ZZ, Kandhavelu JK, Klotzbier WK, Jayatilake MJ, Bansal SB, Farhan MF, Deol SD, Banerjee PPB, Unger KU, Gupta SG, Verma VV, Cheema AKC | 96.1 MB | — | |
| 2025-12-23 | Single-particle cryo-EM data of Apo ReChb [27453 multi-frame micrographs composed of 50 frames each in TIFF format] | Tascon I, Lopez-Alonso JP, Ubarretxena-Belandia I [Pubmed: 39482449] [DOI: 10.1038/s41587-024-02461-3] |
12.3 TB | 3.33 Å | |
| 2025-12-23 | Single-particle cryo-EM data of the quaternary complex of ReChb - crRNA - target dsDNA - collateral dsDNA [34123 multi-frame micrographs composed of 50 frames each in TIFF format] | Tascon I, Lopez-Alonso JP, Ubarretxena-Belandia I [Pubmed: 39482449] [DOI: 10.1038/s41587-024-02461-3] |
14.5 TB | 3.08 Å | |
| 2025-12-22 | Single particle cryoEM dataset of nucleosomes containing H2BK120ub [8392 multi-frame micrographs composed of 199 frames each in MRC format] | Hicks CW [Pubmed: 39149911] [DOI: 10.1093/nar/gkae698] |
4.8 TB | 3.32 - 3.36 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of plunge-frozen beta-galactosidase [11618 multi-frame micrographs composed of 1206 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 6.6 TB | 1.9 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of soft-landed and rehydrated beta-galactosidase [multiple data sets in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Lorenz UJ | 24.1 TB | 2.9 - 3.7 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of plunge-frozen GroEL [9759 multi-frame micrographs composed of 1206 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 5.9 TB | 1.9 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of soft-landed and rehydrated GroEL [multiple data sets in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 20.7 TB | 3.9 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of soft-landed beta-galactosidase [945 multi-frame micrographs composed of 936 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 494.9 GB | 5.9 Å | |
| 2025-12-22 | Transporter associated with antigen processing (TAP) bound to ATP and ADP [13928 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.5 TB | 3.2 - 3.7 Å | |
| 2025-12-22 | Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein bUL49.5 from bovine herpesvirus [19307 multi-frame micrographs composed of 1098 frames each in TIFF format] | Lee J, Manon V, Chen J | 8.6 TB | 2.44 - 3.1 Å | |
| 2025-12-22 | Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein CPXV012 from cowpox virus [24354 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 12.6 TB | 3.0 Å | |
| 2025-12-22 | Common beta cytokine complex micrographs [multiple data sets in TIFF format] | Caveney NA, Rodriguez GE, Pollmann C, Meyer T, Borowska MT, Wilson SC, Wang N, Xiang X, Householder KD, Tao P, Su LL, Saxton RA, Piehler J, Garcia KC [Pubmed: 38614096] [DOI: 10.1016/j.molcel.2024.03.023] |
9.3 TB | 3.6 - 3.8 Å | |
| 2025-12-22 | Cryo electron ptychography of the Thermoplasma acidophilum 20S proteasome [multiple data sets in MRC format] | Li T, Li S, Yan Z, Li X | 1.8 TB | 6.3 - 7.79 Å | |
| 2025-12-22 | High-resolution structural analysis of the cyanobacterial photosystem I complex reveals independent incorporation of small transmembrane and cytoplasmic subunits [9999 multi-frame micrographs composed of 1386 frames each in EER format] | Charras Q, Gupta S, Tichy M, Al-Amoudi A, Lukes M, Konik P, Sobotka R, Novak P, Komenda J, Naschberger A [Pubmed: 40859630] [DOI: 10.1016/j.xplc.2025.101493] |
3.4 TB | 1.83 Å | |
| 2025-12-22 | Complex of BREX proteins BrxB and PglZ from Salmonella typhimurium [multiple data sets in MRC and TIFF formats] | Doyle LA, Stoddard BL, Kaiser BK, Blower TR [Pubmed: 40548935] [DOI: 10.1093/nar/gkaf540] |
9.1 TB | 4.45 Å |