Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-06-29 |  |
Apoferritin with xLPP on [492 multi-frame micrographs composed of 34 frames each in TIFF format] | Yu Y, Olshin PK [DOI: 10.64898/2026.06.05.730245] |
112.6 GB | 1.87 Å |
| 2021-10-19 |  |
Apoferritin, TMV and T20S proteasome in nanofluidic channels [multiple data sets in TIFF format] | Huber ST, Sarajlic E, Huijink R, Weis F, Evers WH, Jakobi AJ [Pubmed: 35060902] [DOI: 10.7554/eLife.72629] |
308.3 GB | 3.0 - 5.4 Å |
| 2026-05-19 |  |
Aquifex aeolicus lumazine synthase I125A mutant [5159 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Azuma Y [DOI: 10.1038/s41467-026-73260-4] |
2.0 TB | — |
| 2026-05-19 |  |
Aquifex aeolicus lumazine synthase L121A mutant [4942 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Azuma Y [DOI: 10.1038/s41467-026-73260-4] |
1.9 TB | — |
| 2026-05-21 |  |
Aquifex aeolicus lumazine synthase R29A mutant [5306 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Azuma Y [DOI: 10.1038/s41467-026-73260-4] |
2.0 TB | — |
| 2026-05-19 |  |
Aquifex aeolicus lumazine synthase [4998 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Azuma Y [DOI: 10.1038/s41467-026-73260-4] |
1.9 TB | — |
| 2026-05-19 |  |
Aquifex aeolicus lumazine synthase in complex with riboflavin synthase [8625 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Azuma Y [DOI: 10.1038/s41467-026-73260-4] |
3.1 TB | — |
| 2023-05-26 |  |
Archaeal DNA ligase and heterotrimeric PCNA with ligatable nicked DNA [multiple data sets in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] |
5.4 TB | 4.2 - 4.38 Å |
| 2023-05-23 |  |
Archaeal DNA ligase and heterotrimeric PCNA with non-ligatable nicked DNA [3014 multi-frame micrographs composed of 37 frames each in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] |
2.1 TB | 4.16 Å |
| 2020-11-20 |  |
Architecture of a catalytically active homotrimeric plant cellulose synthase complex [multiple data sets in TIFF format] | Purushotham PP, Ho RH, Zimmer JZ [Pubmed: 32646917] [DOI: 10.1126/science.abb2978] |
3.4 TB | 3.5 Å |
| 2022-08-08 |  |
Architecture of the human erythrocyte ankyrin-1 complex [multiple data sets in TIFF, MRC and MRCS formats] | Vallese F, Clarke OB [Pubmed: 35835865] [DOI: 10.1038/s41594-022-00792-w] |
5.2 TB | 2.4 Å |
| 2021-11-15 |  |
Arrangements of proteins at reconstituted synaptic vesicle fusion sites depend on membrane separation. [multiple data sets in MRC format] | Ginger L, Malsam J, Sonnen A.F.P., Morado D, Scheutzow A, Söllner T.H., Briggs J.A.G. [Pubmed: 32860428] [DOI: 10.1002/1873-3468.13916] |
70.0 GB | — |
| 2025-03-24 |  |
Array Tomography of Pdzd8 cKO and Fkbp8 KD MEF [multiple data sets in PNG format] | Hirabayashi Y, Nakamura K | 5.9 GB | — |
| 2024-11-06 |  |
Array Tomography of zebrafish axillary lymphoid organ - an external, experimentally accessible immune organ in the zebrafish [multiple data sets in TIFF format] | Castranova D, Dell CW, Narayan K, Weinstein BM [DOI: 10.1101/2024.07.25.605139] |
11.4 GB | — |
| 2023-03-02 |  |
Arthrobacter phage Bridgette [4303 multi-frame micrographs composed of 40 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.6 TB | 4.0 Å |
| 2016-09-21 |  |
Asymmetric cryo-EM reconstruction of phage MS2 reveals genome structure in situ [751 micrographs in MRC format] | Koning RI, Gomez-Blanco J, Akopjana I, Vargas J, Kazaks A, Tars K, Carazo JM, Koster AJ [Pubmed: 27561669] [DOI: 10.1038/ncomms12524] |
46.9 GB | 5.0 - 10.5 Å |
| 2022-01-31 |  |
Asymmetric structures of the uncleaved full-length HIV-1 envelope glycoprotein trimer [multiple data sets in MRC and BIG DATA VIEWER HDF5 formats] | Zhang S, Wang KY, Wang WL, Chen S, Sodroski JG, Mao Y [Pubmed: 34549974] [DOI: 10.1128/JVI.00529-21] |
4.0 TB | 4.1 - 4.7 Å |
| 2020-05-27 |  |
Atomic resolution structure of apoferritin [3370 multi-frame micrographs composed of 434 frames each in EER format] | Nakane T, Kotecha A, Sente A, McMullan G, Masiulis S, Brown PMGE, Grigoras IT, Malinauskaite L, Malinauskas T, Miehling J, Uchański T, Yu L, Karia D, Pechnikova EV, de Jong E, Keizer J, Bischoff M, McCormack J, Tiemeijer P, Hardwick SW, Chirgadze DY, Murshudov G, Aricescu AR, Scheres SHW [Pubmed: 33087931] [DOI: 10.1038/s41586-020-2829-0] |
538.1 GB | 1.22 Å |
| 2021-02-12 |  |
Atomic resolution structure of apoferritin from Titan Mono/BCorr microscope [43292 multi-frame micrographs composed of 40 frames each in MRC format] | Yip KM, Fischer N, Paknia E, Chari A, Stark H [Pubmed: 33087927] [DOI: 10.1038/s41586-020-2833-4] |
18.7 TB | 1.15 - 1.56 Å |
| 2024-06-13 |  |
Atomic structure and conformational variability of the HER2-trastuzumab-pertuzumab complex [stack of 708609 particles in MRCS format] | Ruedas R, Vuillemot R, Tubiana T, Winter JM, Pieri L, Arteni AA, Samson C, Jonic S, Mathieu M, Bressanelli S [Pubmed: 38723875] [DOI: 10.1016/j.jsb.2024.108095] |
207.2 GB | 3.01 - 3.33 Å |
| 2022-04-19 |  |
Atomic structure of Lanreotide nanotubes revealed by cryo-EM [stack of 631121 particles in MRCS format] | Pieri L, Wang F, Bressanelli S, Egelman EH, Paternostre M [Pubmed: 35042822] [DOI: 10.1073/pnas.2120346119] |
362.5 GB | 2.46 Å |
| 2023-10-06 |  |
Atypical flagella assembly and haploid genome coiling during male gamete formation in Plasmodium [multiple data sets in MRC format] | Hair M [DOI: 10.1101/2023.05.17.540968] |
100.7 GB | — |
| 2024-07-03 |  |
Automatically collected tilt series on cryoFIB milled lamellae of Baker's Yeast [multiple data sets in TIFF and MRC formats] | Eisenstein F, Fukuda Y, Danev R [Pubmed: 39117874] [DOI: 10.1038/s41592-024-02373-9] |
1.2 TB | — |
| 2024-11-08 |  |
Automethylated PRC2 dimer bound to nucleosome [multiple data sets in MRC format] | Sauer PV, Pavlenko E, Nogales E, Poepsel S, Cookis T [Pubmed: 39303719] [DOI: 10.1016/j.molcel.2024.08.025] |
1.8 TB | 4.0 - 6.2 Å |
| 2026-04-20 |  |
BG505.SOSIP.664.T332N gp140 trimer in complex with 44m bnAb [4916 multi-frame micrographs composed of 20 frames each in MRC format] | Dutta S [Pubmed: 37649696] [DOI: 10.1016/j.isci.2023.107579] |
733.3 GB | 4.4 Å |
