Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-03-13 | cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 2 [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
741.0 GB | — | |
| 2026-03-12 | cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 3 [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
350.1 GB | — | |
| 2026-03-12 | cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 4 [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
342.3 GB | — | |
| 2026-03-12 | cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 5 [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
122.7 GB | — | |
| 2026-03-12 | cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 6 [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
47.9 GB | — | |
| 2026-03-12 | cryo electron tomography of mouse hippocampal CA1-py dataset [multiple data sets in EER and MRC formats] | Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] |
175.8 GB | — | |
| 2024-04-09 | cryo-EM 3D maps of the S. cerevisiae Yta7 bound to ATPgS and histone H3 tail [12138 multi-frame micrographs composed of 75 frames each in TIFF format] | Wang FW [Pubmed: 36592926] [DOI: 10.1016/j.jbc.2022.102852] |
6.9 TB | 3.0 - 3.1 Å | |
| 2024-03-26 | cryo-EM 3D maps of the S. cerevisiae Yta7 bound to the reconstituted nucleosome [16532 multi-frame micrographs composed of 75 frames each in TIFF format] | Wang FW [Pubmed: 36592926] [DOI: 10.1016/j.jbc.2022.102852] |
8.4 TB | 10.0 Å | |
| 2026-05-31 | cryo-EM data for Drosophila Insulin Receptor ectodomain with DILP2 hormone [multiple data sets in EER format] | Shafi T, Moroz OV, Jenkins HT, Chechik M, Isupov MN, Brzozowski AM [DOI: 10.1098/rsob.250351] |
3.4 TB | 3.7 - 6.25 Å | |
| 2025-02-04 | cryo-EM micrographs of RNF168(1-113)/UbcH5c~Ub/H2AK13Ub nucleosome complex [8480 micrographs in MRC format] | Ai HS, Tong ZB, Deng ZH, Tian CL, Liu L, Pan M [DOI: 10.1101/2024.01.02.573964] |
744.4 GB | 3.27 - 3.52 Å | |
| 2021-02-12 | cryo-EM single particle dataset of a DNA nanostructure called "The Pointer-v2" [2381 multi-frame micrographs composed of 62 frames each in MRCS format] | Kube M, Kohler F, Feigl E, Nagel-Yüksel B, Willner EM, Funke JJ, Gerling T, Stömmer P, Honemann MN, Martin TG, Scheres SHW, Dietz H [Pubmed: 33277481] [DOI: 10.1038/s41467-020-20020-7] |
9.0 TB | 7.4 Å | |
| 2023-10-13 | cryo-EM structure of a broadly neutralizing anti-SARS-CoV-2 antibody STI-9167 [20590 micrographs in MRC format] | Bajic G [Pubmed: 38054729] [DOI: 10.1128/mbio.02477-23] |
1.8 TB | 3.16 Å | |
| 2024-12-01 | cryo-EM structure of a non-neutralizing antibody V5-4 in complex with SARS-CoV-2 spike [5895 micrographs in MRC format] | Bajic G [Pubmed: 39504245] [DOI: 10.1016/j.celrep.2024.114922] |
517.5 GB | 3.6 Å | |
| 2025-02-10 | cryo-EM structure of human tRNA(AspGUC) - PUS4 and PUS7 modified [7511 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
659.5 GB | 5.83 Å | |
| 2025-02-10 | cryo-EM structure of human tRNA(GlnUUG) - PUS4 and PUS7 modified [8610 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
756.0 GB | 5.1 Å | |
| 2025-02-04 | cryo-EM structure of human tRNA(GlnUUG) [6112 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
536.7 GB | 4.95 Å | |
| 2024-07-16 | cryo-EM structure of human tRNA(GluUUC) - PUS4 and PUS7 modified [6112 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
536.7 GB | 4.95 Å | |
| 2024-07-08 | cryo-EM structure of human tRNA(GlyCCC) - PUS4 and PUS7 modified [8211 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
721.0 GB | 5.34 Å | |
| 2024-07-16 | cryo-EM structure of human tRNA(GlyCCC) [6016 micrographs in MRC format] | Biela AP, Glatt S [Pubmed: 40301665] [DOI: 10.1038/s44318-025-00443-y] |
528.2 GB | 5.23 Å | |
| 2024-02-29 | cryo-EM structure of nucleotide-free rMRP2 [12785 multi-frame micrographs composed of 50 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB [Pubmed: 38438394] [DOI: 10.1038/s41467-024-46392-8] |
2.0 TB | 3.21 Å | |
| 2024-02-29 | cryo-EM structure of rMRP2 in complex with probenecid [13827 multi-frame micrographs composed of 40 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB [Pubmed: 38438394] [DOI: 10.1038/s41467-024-46392-8] |
1.9 TB | 3.45 Å | |
| 2022-09-09 | cryo-EM structure of the ADP state wild type myosin-15-F-actin complex [1624 multi-frame micrographs composed of 24 frames each in TIFF format] | Gong R, Bird JE, Alushin GM [Pubmed: 35857845] [DOI: 10.1126/sciadv.abl4733] |
313.4 GB | 3.63 - 4.15 Å | |
| 2022-09-09 | cryo-EM structure of the rigor state wild type myosin-15-F-actin complex [1485 multi-frame micrographs composed of 40 frames each in TIFF format] | Gong R, Bird JE, Alushin GM [Pubmed: 35857845] [DOI: 10.1126/sciadv.abl4733] |
506.7 GB | 2.83 - 3.17 Å | |
| 2019-11-18 | cryo-ET of cryo-FIB milled yeast cell in which scs2/22 ist2 are deleted [multiple data sets in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
12.8 GB | — | |
| 2019-11-18 | cryo-ET of cryo-FIB milled yeast cell in which scs2/22 ist2 are deleted with high intracellular calcium [121 tilt series in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
14.3 GB | — |