Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some datasets are currently inaccessible or incomplete (marked as Incomplete dataset).
We are pleased to report that the following entries have been restored:
EMPIAR-10577 (New)We are still accepting requests for datasets you would like us to download first (email, inquiry).
We apologize for the inconvenience and appreciate your understanding.
EMPIAR-PDBj services will be suspended during the following period for a legally required inspection of electrical equipment.
During this period, the website and data downloads from EMPIAR-PDBj will be unavailable.
Please use EMPIAR-EBI instead.
We apologize for any inconvenience.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-11-04 |  |
CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation [11627 multi-frame micrographs composed of 50 frames each in MRC format] | Singh PK, Iverson TM [Pubmed: 37205674] [DOI: 10.1371/journal.pone.0285343] |
11.7 TB | 2.9 - 4.1 Å |
| 2018-06-20 |  |
An atomic structure of human gamma-secretase [2925 multi-frame micrographs composed of 20 frames each in MRCS format] | Bai XC, Yan C, Yang G, Lu P, Ma D, Sun L, Zhou R, Scheres SHW, Shi Y [Pubmed: 26280335] [DOI: 10.1038/NATURE14892] |
11.7 TB | 3.4 Å |
| 2022-11-18 |  |
Cryo-EM reconstruction of TNKS2 SAM-PARP filament [multiple data sets in MRCS, MRC and TIFF formats] | Mariotti L, Inian O, Desfosses A, Beuron F, Morris E.P, Guettler S [Pubmed: 36418402] [DOI: 10.1038/s41586-022-05449-8] |
11.8 TB | 2.98 Å |
| 2026-10-07 |  |
Cryo-EM datasets of human Argonaute2 pre-RISC and mature RISC-target, PDB 9YM9, 9YMA, 9YMB, 9YMC, 9YMD, and 10BE [multiple data sets in TIFF and EER formats] | Zhang H, Nakanishi K [Pubmed: 42190652] [DOI: 10.1016/j.molcel.2026.04.029] |
11.9 TB | 3.02 - 3.87 Å |
| 2025-10-08 |  |
Engineered peptide-specific binder in complex with HLA-DR1/CLIP [21332 multi-frame micrographs composed of 1 frames each in EER format] | Jude KM, Yang X, Du H, Kassardjian A, Julien JP, Huang PS, Garcia KC [Pubmed: 39672953] [DOI: 10.1038/s41587-024-02466-y] |
11.9 TB | 2.28 Å |
| 2023-09-11 |  |
Cryo-EM micrographs of HIV-1 Vif bound to human APOBEC3H, CBF-beta, ELOB, ELOC, CUL5, and RBX2 [12546 multi-frame micrographs composed of 2130 frames each in TIFF format] | Ito F, Alvarez-Cabrera AL, Kim K, Zhou ZH, Chen XS [Pubmed: 37640699] [DOI: 10.1038/s41467-023-40955-x] |
11.9 TB | 5.14 Å |
| 2026-10-07 |  |
Trm10-tRNA complex [26645 tilt series in TIFF format] | Nandi S [Pubmed: 41427370] [DOI: 10.64898/2025.12.12.694034] |
12.0 TB | 3.37 - 3.89 Å |
| 2024-05-20 |  |
Cryo-EM of the human CAK: Data for 1.73 Å-resolution reconstruction [multiple data sets in EER format] | Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
12.1 TB | 1.7 Å |
| 2025-12-23 |  |
Single-particle cryo-EM data of Apo ReChb [27453 multi-frame micrographs composed of 50 frames each in TIFF format] | Tascon I, Lopez-Alonso JP, Ubarretxena-Belandia I [Pubmed: 39482449] [DOI: 10.1038/s41587-024-02461-3] |
12.3 TB | 3.33 Å |
| 2025-07-08 |  |
Raw cryo-EM micrographs from the publication "Structure and Function of Stator Units of the Bacterial Flagellar Motor" [47590 multi-frame micrographs composed of 40 frames each in MRC format] | Santiveri M, Roa-Eguiara A, Kühne C, Wadhwa N, Hu H, Berg HC, Erhardt M, Taylor NMI [Pubmed: 32931735] [DOI: 10.1016/j.cell.2020.08.016] |
12.3 TB | 2.98 - 3.1 Å |
| 2021-08-06 |  |
Cryo-EM structures of engineered active bc1-cbb3 type CIII2CIV super-complexes and electronic communication between the complexes [multiple data sets in MRCS, TIFF and MRC formats] | Steimle S, VanEeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F [Pubmed: 33568648] [DOI: 10.1038/s41467-021-21051-4] |
12.4 TB | 3.3 - 7.2 Å |
| 2024-06-18 |  |
β2-adrenergic receptor in complex with GTP-bound G protein Gs, vitrified 10 seconds after addition of GTP [multiple data sets in TIFF format] | Papasergi-Scott MM, Skiniotis G [Pubmed: 38480881] [DOI: 10.1038/s41586-024-07153-1] EMD-29985 EMD-29986 EMD-29987 EMD-29988 EMD-29989 EMD-29990 EMD-29991 EMD-29992 EMD-29993 EMD-29994 EMD-29995 EMD-29996 EMD-29997 EMD-29998 EMD-29999 EMD-40000 EMD-40001 EMD-40002 EMD-40004 EMD-40005 EMD-40009 EMD-40010 EMD-40011 EMD-40012 EMD-40013 EMD-40014 EMD-40015 EMD-40016 EMD-40017 EMD-40018 EMD-40019 EMD-40020 EMD-40021 EMD-40022 EMD-40023 EMD-40024 EMD-40025 EMD-40026 EMD-40027 EMD-40028 EMD-40156 EMD-40157 EMD-40158 EMD-40159 EMD-40160 EMD-40161 EMD-40163 EMD-40164 EMD-40165 EMD-40166 EMD-40167 EMD-40168 EMD-40169 EMD-40170 EMD-40171 EMD-40172 EMD-40173 EMD-40174 EMD-40175 EMD-40176 EMD-42408 EMD-42409 EMD-42410 EMD-42411 EMD-42412 EMD-42413 EMD-42414 EMD-42415 EMD-42416 EMD-42417 EMD-42418 EMD-42419 EMD-42420 EMD-42421 EMD-42422 EMD-42423 EMD-42424 EMD-42425 EMD-42426 EMD-42427 EMD-40116 EMD-40117 EMD-40118 EMD-40119 EMD-40120 EMD-40121 EMD-40122 EMD-40123 EMD-40124 EMD-40125 EMD-40126 EMD-40127 EMD-40128 EMD-40129 EMD-40130 EMD-40131 EMD-40132 EMD-40133 EMD-40134 EMD-40135 |
12.6 TB | 2.9 - 4.1 Å |
| 2025-12-22 |  |
Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein CPXV012 from cowpox virus [24354 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 12.6 TB | 3.0 Å |
| 2025-09-02 |  |
In situ insights into antibody-neutralization of a pre-fusion Junin virus glycoprotein complex [39837 multi-frame micrographs composed of 40 frames each in TIFF format] | Rodriguez JAR, Taylor LJT [Pubmed: 40632652] [DOI: 10.1016/j.celrep.2025.115971] |
12.7 TB | 3.8 Å |
| 2022-09-05 |  |
Single-Particle CryoEM of mammalian V-ATPase with the TLDc domain protein mEAK7 bound (Various Datasets) [multiple data sets in MRCS, MRC and EER formats] | Tan YZ, Abbas YM, Wu JZ, Wu D, Keon KA, Hesketh GG, Bueler SA, Gingras AC, Robinson CV, Grinstein S, Rubinstein JL [Pubmed: 35794005] [DOI: 10.26508/lsa.202201527] |
12.7 TB | 3.5 - 4.1 Å |
| 2026-01-21 |  |
Cryo-EM structure of the transmembrane anti-sigma factor DdvA [multiple data sets in TIFF format] | Lopez-Alonso JP, Ochoa-Lizarralde B, Tascon I, Ubarretxena-Belandia I [Pubmed: 39454004] [DOI: 10.1126/sciadv.adp1053] |
12.7 TB | 2.94 - 3.11 Å |
| 2025-06-30 |  |
CryoEM dataset of Retron-Eco1 "-1-turn" mutant filaments in the presence of NAD+ [28871 multi-frame micrographs composed of 40 frames each in EER format] | Carabias A, Camara-Wilpert S, Mestre MR, Lopéz-Méndez B, Hendriks IA, Zhao R, Pape T, Fuglsang A, Luk SH, Nielsen ML, Pinilla-Redondo R, Montoya G [Pubmed: 38788717] [DOI: 10.1016/j.molcel.2024.05.001] |
12.8 TB | 2.43 Å |
| 2025-07-25 |  |
Cysteine tRNA ligase homodimer [multiple data sets in MRC and EER formats] | Schweke H, Pacesa M, Levin T, Goverde CA, Kumar P, Duhoo Y, Dornfeld LJ, Dubreuil B, Georgeon S, Ovchinnikov S, Woolfson DN, Correia BE, Dey S, Levy ED [Pubmed: 38325366] [DOI: 10.1016/j.cell.2024.01.022] |
12.8 TB | 2.8 Å |
| 2023-03-27 |  |
Cryo-EM structure of the ribosome/Sec61 translocon with a macrocyclic inhibitor KZR-8445 [multiple data sets in TIFF and MRC formats] | Rehan S [Pubmed: 37169961] [DOI: 10.1038/s41589-023-01326-1] |
12.9 TB | 3.2 Å |
| 2024-04-07 |  |
Cryo-EM of BtCoV-HKU5 5' proximal stem-loop 5 [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
12.9 TB | 5.9 - 8.0 Å |
| 2026-09-21 |  |
Cryo-EM structure of the bovine ATP synthase [multiple data sets in TIFF format] | Nakano A [Pubmed: 42399642] [DOI: 10.1038/s41418-026-01797-4] |
13.0 TB | 2.3 - 7.2 Å |
| 2020-11-13 |  |
High resolution structure of GABAAR beta3 homopentamer [multiple data sets in EER and TIFF formats] | Nakane T, Kotecha A, Sente A, McMullan G, Masiulis S, Brown PMGE, Grigoras IT, Malinauskaite L, Malinauskas T, Miehling J, Uchański T, Yu L, Karia D, Pechnikova EV, de Jong E, Keizer J, Bischoff M, McCormack J, Tiemeijer P, Hardwick SW, Chirgadze DY, Murshudov G, Aricescu AR, Scheres SHW [Pubmed: 33087931] [DOI: 10.1038/s41586-020-2829-0] |
13.0 TB | 1.7 Å |
| 2026-01-11 |  |
Single-particle cryo-EM data of the ternary complex of ReChb - crRNA - target dsDNA [43778 multi-frame micrographs composed of 50 frames each in TIFF format] | Tascon I, Lopez-Alonso JP, Ubarretxena-Belandia I [Pubmed: 39482449] [DOI: 10.1038/s41587-024-02461-3] |
13.1 TB | 3.14 Å |
| 2021-06-16 |  |
TSC complex particles [3507 multi-frame micrographs composed of 1 frames each in MRC format] | Ramlaul K, Fu W, Li H, de Martin Garrido N, He L, Trivedi M, Cui W, Aylett CHS, Wu G [Pubmed: 33307091] [DOI: 10.1016/j.jmb.2020.166743] |
13.1 TB | 4.2 Å |
| 2024-04-22 |  |
Cryo-EM Structures of human telomerase with TPP1-POT1 and telomerase H/ACA RNP [multiple data sets in TIFF and MRC formats] | Ghanim GEG, Sekne ZS, Balch SB, M. van Roon MVR, Nguyen THDN [Pubmed: 35201900] [DOI: 10.1126/science.abn6840] |
13.2 TB | 2.7 - 3.9 Å |
