Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-03-24 | Single particle cryo-EM dataset of the light-driven sodium pump ErNaR prepared by jet vitrification [13007 multi-frame micrographs composed of 50 frames each in EER format] | Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ [Pubmed: 41332690] [DOI: 10.1101/2025.11.21.689681] |
3.7 TB | 2.1 Å | |
| 2024-06-13 | Cryo electron microscopy unaligned movie frames for single particle analysis of the Escherichia coli 70S ribosome with Myxovalargin A [8208 multi-frame micrographs composed of 40 frames each in TIFF format] | Koller TO, Wilson DN [Pubmed: 36603206] [DOI: 10.1021/jacs.2c08816] |
946.3 GB | 2.1 - 3.0 Å | |
| 2024-09-15 | Cryo-EM structure of HflX bound to the Listeria monocytogenes 50S ribosomal subunit [4480 multi-frame micrographs composed of 20 frames each in TIFF format] | Koller TO, Wilson DN [Pubmed: 36300626] [DOI: 10.1093/nar/gkac934] |
320.2 GB | 2.1 - 3.1 Å | |
| 2021-11-15 | Apoferritin 20% glycerol, 300kV [1859 multi-frame micrographs composed of 35 frames each in TIFF format] | Basanta B, Hirschi MM, Grotjahn DA, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
477.7 GB | 2.1 Å | |
| 2025-07-03 | Dunaliella tertiolecta PSI-LHCI supercomplex [10090 multi-frame micrographs composed of 50 frames each in TIFF format] | Liu HW, Khera R, Iwai M, Merchant SS [Pubmed: 40523173] [DOI: 10.1073/pnas.2500621122] |
3.0 TB | 2.1 Å | |
| 2025-07-08 | Cryo electron microscopy unaligned movie frames for single particle analysis of the Escherichia coli 70S ribosome with Myxovalargin B [5132 multi-frame micrographs composed of 20 frames each in MRC format] | Koller TO, Wilson DN [Pubmed: 36603206] [DOI: 10.1021/jacs.2c08816] |
443.7 GB | 2.1 - 3.0 Å | |
| 2023-05-16 | Cryo-Electron microscopy of the antimicrobial peptide Drosocin from Drosophila melanogaster bound to the E.coli 70S ribosome. [8861 multi-frame micrographs composed of 1532 frames each in EER format] | Koller TO, Morici M, Berger M, Safdari HA, Beckert B, Wilson DN [Pubmed: 36997646] [DOI: 10.1038/s41589-023-01293-7] |
7.9 TB | 2.1 - 2.8 Å | |
| 2026-03-19 | Reducing the effects of radiation damage in cryo-EM using liquid helium cooling [2946 multi-frame micrographs composed of 120 frames each in TIFF format] | Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ [Pubmed: 40261934] [DOI: 10.1073/pnas.2421538122] |
381.8 GB | 2.1 - 3.32 Å | |
| 2022-09-12 | Structures of the Cyanobacterial Phycobilisome in the Light-harvesting and Photoprotected States [multiple data sets in MRC and TIFF formats] | Sauer PV, Dominguez-Martin MA, Kerfeld CA [Pubmed: 36045294] [DOI: 10.1038/s41586-022-05156-4] |
16.7 TB | 2.1 - 3.5 Å | |
| 2026-04-15 | CryoEM movies of Rabbit muscle Aldolase determined using the SPT Labtech chameleon in the presence of 1x SurfACT. [multiple data sets in EER and MRC formats] | Enos SE, Cook BD, Rahmani H, Narehood SM, Li Y, Kuschnerus IC, Redford HT, Dukakis P, Ji D, Bachochin MJ, Grotjahn DA, Herzik MA [Pubmed: 41889805] [DOI: 10.64898/2026.03.17.712260] |
644.9 GB | 2.1 - 2.34 Å | |
| 2026-06-29 | Single-Particle Cryo-EM of a Nucleosome Containing a Single-Strand Break at SHL −2.8 Bound to the Human PARP2 [7836 multi-frame micrographs composed of 49 frames each in TIFF format] | Jayathilake C, Mewhinney CE, Gregory-Lott ER, Virk RK, Nair R, Yang J, Cho E, Day AG, Taylor DJ, Kim TH [Pubmed: 41819421] [DOI: 10.1016/j.jmb.2026.169753] |
3.8 TB | 2.1 - 2.37 Å | |
| 2021-06-04 | Cryo-EM of GLP-1 receptor bound to GLP-1 and Gs protein [5739 multi-frame micrographs composed of 75 frames each in TIFF format] | Zhang X, Belousoff MJ, Zhao P, Kooistra AJ, Truong TT, Ang SY, Underwood CR, Egebjerg T, Šenel P, Stewart GD, Liang YL, Glukhova A, Venugopal H, Christopoulos A, Furness SGB, Miller LJ, Reedtz-Runge S, Langmead CJ, Gloriam DE, Danev R, Sexton PM, Wootten D [Pubmed: 33027691] [DOI: 10.1016/j.molcel.2020.09.020] |
1.9 TB | 2.1 Å | |
| 2022-03-14 | 2.1Å T20S Proteosome from 200kV Glacios with Selectris Falcon 4 [4075 multi-frame micrographs composed of 854 frames each in EER format] | Koh FA, Khavnekar K, Kotecha A [Pubmed: 35377368] [DOI: 10.3791/63519] |
1.5 TB | 2.1 Å | |
| 2018-10-23 | bovine liver glutamate dehydrogenase [4982 micrographs in MRC format] | Eng ET, Kelley K, Jordan KJ, Kopylov M, Carragher BO, Potter CS | 264.5 GB | 2.1 Å | |
| 2025-12-07 | Single particle cryoEM of Jumbophage Gp316/JADA protein [15625 multi-frame micrographs composed of 50 frames each in EER format] | Muralidharan A, Rita Costa A, Fierlier D, van den Berg DF, van den Bossche H, Zoumaro-Djayoon A, Pabst M, Pacesa M, Correia BE, Brouns SJJ [DOI: 10.1101/2025.07.08.663546] |
6.4 TB | 2.1 Å | |
| 2018-10-25 | Thermoplasma acidophilum 20S [1175 multi-frame micrographs composed of 50 frames each in MRC format] | Eng ET, Kopylov M, Negro CJ, Dallaykan S, Rice WJ, Jordan KJ, Kelley K, Carragher BO, Potter CS | 1.5 TB | 2.1 Å | |
| 2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAm6A mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [7207 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
2.7 TB | 2.11 - 2.62 Å | |
| 2024-07-16 | Cryo-EM of Caulobacter crescentus FljM flagellar filament [9780 multi-frame micrographs composed of 45 frames each in TIFF format] | Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER [Pubmed: 37503001] [DOI: 10.1101/2023.07.10.548443] |
1.9 TB | 2.11 Å | |
| 2020-11-23 | CryoEM structure of EPYC1(49-72) peptide-bound Rubisco [2500 multi-frame micrographs composed of 50 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
1.2 TB | 2.13 Å | |
| 2025-07-12 | Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys [multiple data sets in TIFF and MRC formats] | Basu RS, Gagnon MG, Polikanov YS [Pubmed: 40536958] [DOI: 10.1126/science.ads9030] |
4.1 TB | 2.13 Å | |
| 2023-02-13 | Spinacia oleracea endogenous cytochrome b6f complex [7651 multi-frame micrographs composed of 40 frames each in TIFF format] | Jaciuk M, Koziej L, Pintscher S, Indyka P, Rawski M, Glatt S [Pubmed: 36638176] [DOI: 10.1126/sciadv.add9688] |
2.9 TB | 2.13 Å | |
| 2020-04-24 | Rabbit muscle aldolase movies obtained using a Talos Arctica (200 kV) equipped with a K2 [3316 multi-frame micrographs composed of 44 frames each in TIFF format] | Wu M, Lander GC, Herzik MA [Pubmed: 32647824] [DOI: 10.1016/j.yjsbx.2020.100020] |
543.3 GB | 2.13 Å | |
| 2023-06-30 | E. coli 50S ribosome bound to tiamulin and VS1 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.0 TB | 2.13 Å | |
| 2026-07-13 | Cryo electron micrographs of 3-methylcrotonyl-CoA carboxylase and its variable α-Cap Assemblies in Legionella pneumophila [31641 micrographs in MRC format] | Durie CL [Pubmed: 41509382] [DOI: 10.64898/2025.12.22.694428] |
988.8 GB | 2.13 - 2.68 Å | |
| 2026-05-01 | Single-particle cryo-EM dataset of H. neapolitanus CsoSCA in oxidizing conditions (active) [multiple data sets in TIFF and MRC formats] | Gaullier G, Vogiatzi N, Blikstad C [DOI: 10.64898/2026.04.02.716132] |
1.3 TB | 2.13 - 2.45 Å |