Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-06-29 | E. coli 50S ribosome bound to solithromycin and VM1 [multiple data sets in MRC and TIFF formats] | Fraser JS, Seiple IB, Pellegrino J, Lee DJ | 3.2 TB | 1.99 Å | |
| 2023-02-28 | GroEL on EG-grid [531 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
95.2 GB | 1.99 Å | |
| 2024-12-12 | Cryo-EM of human CAK: Microscope comparisons [multiple data sets in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
10.2 TB | 2.0 Å | |
| 2026-04-07 | Cryo-EM of Connexin-46/50 in DMPC nanodiscs returned to neutral pH (Collection #6) [6140 multi-frame micrographs composed of 50 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
2.2 TB | 2.0 - 2.7 Å | |
| 2019-09-27 | Cryo-EM structure of TMV with Ca2+ at low pH [197 multi-frame micrographs composed of 40 frames each in TIFF format] | Weis F, Beckers M, von der Hocht I, Sachse C [Pubmed: 31535454] [DOI: 10.15252/embr.201948451] |
22.0 GB | 2.0 Å | |
| 2026-04-07 | Cryo-EM of connexin-46/50 in DMPC nanodiscs at low pH (Collection #4) [6057 multi-frame micrographs composed of 45 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
2.3 TB | 2.0 - 2.7 Å | |
| 2026-04-07 | Cryo-EM of connexin-46/50 in DMPC nanodiscs at neutral pH (Collection #3) [3261 multi-frame micrographs composed of 45 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
1.3 TB | 2.0 - 2.7 Å | |
| 2020-04-09 | Cryo-EM structure of Lumazine Synthase [1198 multi-frame micrographs composed of 41 frames each in MRC format] | Bhella D, Streetley J, Clarke M, Cowton V, Patel A [Pubmed: 31359340] [DOI: 10.1007/s12551-019-00571-w] |
3.0 TB | 2.0 Å | |
| 2020-04-09 | Cryo-EM structure of Lumazine Synthase [2874 multi-frame micrographs composed of 39 frames each in MRC format] | Bhella D, Streetley J, Clarke M, Cowton V, Patel A [Pubmed: 31359340] [DOI: 10.1007/s12551-019-00571-w] |
6.8 TB | 2.0 Å | |
| 2026-07-14 | Stomatin encapsulates aquaporin-1 and urea transporter-B in the erythrocyte membrane [multiple data sets in TIFF and MRC formats] | Vallese F, Clarke OB [Pubmed: 41921000] [DOI: 10.1126/sciadv.aec1721] |
3.6 TB | 2.0 Å | |
| 2021-05-16 | Cryo-EM structure of a thermostable encapsulin from T. maritima [2771 multi-frame micrographs composed of 67 frames each in TIFF format] | Wiryaman TI, Toor N [Pubmed: 33953921] [DOI: 10.1107/S2052252521001949] |
1.6 TB | 2.0 Å | |
| 2021-05-17 | Single-Particle CryoEM of Human Apoferritin Light Chain Vitrified Using Back-it-up [multiple data sets in MRCS and MRC formats] | Tan YZ, Rubinstein JL [Pubmed: 33135680] [DOI: 10.1107/S2059798320012474] |
2.1 TB | 2.0 Å | |
| 2023-10-20 | Regularisation by denoising lowers the size barrier of cryo-EM structure determination [multiple data sets in MRC and MRCS formats] | Lövestam S [Pubmed: 38030728] [DOI: 10.1038/s41586-023-06788-w] |
81.5 GB | 2.0 Å | |
| 2025-05-23 | Cryo-EM structure of the 55 kDa nucleoplasmin domain of AtFKBP53 [8687 multi-frame micrographs composed of 594 frames each in EER format] | Bharambe N, Basak S [Pubmed: 40262726] [DOI: 10.1016/j.jsb.2025.108203] |
2.2 TB | 2.0 Å | |
| 2024-09-02 | Cryo electron micrographs of 70S Escherichia coli ribosomes [4388 multi-frame micrographs composed of 35 frames each in TIFF format] | Gersteuer FG, Morici MM, Wilson DNW [Pubmed: 38503753] [DOI: 10.1038/s41467-024-46762-2] |
2.0 TB | 2.0 - 2.6 Å | |
| 2026-03-20 | Single particle cryo-EM dataset of as-prepared Bos taurus mitochondrial complex I in MSP2N2 nanodiscs treated with NADH [13056 multi-frame micrographs composed of 40 frames each in TIFF format] | Chung I, Hirst J [Pubmed: 41786699] [DOI: 10.1038/s41467-026-70030-0] |
5.2 TB | 2.01 - 2.61 Å | |
| 2026-06-01 | Cryo-EM structure of horse spleen apoferritin using the cryoWriter automated grid preparation system with one-time writing with a line pattern [4922 micrographs in MRC format] | Chinmaya KV, Baba E, Marta DF, Inayathulla M, Julika R, Stahlberg H, Kube M [Pubmed: 42218131] [DOI: 10.1038/s41467-026-73752-3] |
153.8 GB | 2.02 Å | |
| 2023-09-22 | Carboxysome minishell containing CsoS1A4A and truncated CsoS2 [13151 multi-frame micrographs composed of 40 frames each in TIFF format] | Ni T, Jiang Q, Ng PC, Dou H, Liu LN, Zhang P [Pubmed: 37679318] [DOI: 10.1038/s41467-023-41211-y] |
2.2 TB | 2.02 - 3.29 Å | |
| 2022-02-04 | The pump-like chanelrhodopsin ChRmine [3528 multi-frame micrographs composed of 48 frames each in TIFF format] | Kishi KE, Kim YS, Fukuda M, Yamahita K [Pubmed: 35114111] [DOI: 10.1016/j.cell.2022.01.007] |
850.8 GB | 2.02 Å | |
| 2025-05-14 | Single-particle cryo-EM of Staphylococcus aureus ribosomes inhibited by fusidic acid and fusidic acid cyclopentane [multiple data sets in EER, TIFF and MRC formats] | González-López A, Larsson DSD, Selmer M [Pubmed: 38902339] [DOI: 10.1038/s41598-024-64868-x] |
11.1 TB | 2.02 - 2.49 Å | |
| 2026-06-08 | Time-resolved cryo-EM particle stacks [multiple data sets in MRC format] | Greene E, Muniz R, Yamamura H, Hoff SE, Bajaj P, Lee DJ, Thompson EM, Arada A, Lee GM, Bonomi M, Kollman JM, Fraser JS [Pubmed: 40631248] [DOI: 10.1101/2025.07.04.663231] |
8.9 TB | 2.03 Å | |
| 2026-03-06 | Cryo-EM structure of E. coli MaeB acetyl-CoA bound form and the ME domain dimer [24546 multi-frame micrographs composed of 40 frames each in TIFF format] | Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T [Pubmed: 41197718] [DOI: 10.1016/j.jbc.2025.110887] |
4.4 TB | 2.03 - 2.39 Å | |
| 2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAA mRNA codon in the A-site [10115 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.8 TB | 2.04 Å | |
| 2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAm6A mRNA codon in the A-site [10276 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
4.0 TB | 2.04 Å | |
| 2024-04-17 | Structure of human constitutive 20S proteasome complexed with the inhibitor TDI-8304 [16113 multi-frame micrographs composed of 50 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38097652] [DOI: 10.1038/s41467-023-44077-2] |
6.5 TB | 2.04 Å |