Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-05-23 | Cryo electron microscopy of human SCFbxo22 in complex with protacs, neosubstrates and endogeneous substrates. [multiple data sets in MRC format] | Amann SJ, Robertson KC, Liu T, James LI, Brown NG, Haselbach D [Pubmed: 42026065] [DOI: 10.1038/s41467-026-72235-9] |
4.5 TB | 4.0 - 5.9 Å | |
| 2026-07-02 | Cryo-EM tomography raw tilt series data of human apo-ferrtin data collection using continuous recording based beam image shift (CR-BIS) [770 multi-frame micrographs composed of 70 frames each in EER format] | Yang Q, Huang XJ, Wu CL, Zeng Y, Zhang XZ [Pubmed: 42285946] [DOI: 10.1038/s41467-026-74373-6] |
120.3 GB | 2.24 Å | |
| 2026-06-30 | Cryo-EM single particle raw data of human apo-ferrtin data collection using continuous recording based beam image shift (CR-BIS) [33 multi-frame micrographs composed of 9198 frames each in EER format] | Yang Q, Huang XJ, Wu CL, Zeng Y, Zhang XZ [Pubmed: 42285946] [DOI: 10.1038/s41467-026-74373-6] |
117.6 GB | 1.64 Å | |
| 2026-04-22 | Tau Paired Helical Filament from Alzheimer's Disease incubated with D-peptide D-TLKIVWI [multiple data sets in EER format] | Hou K, Ge P, Sawaya MR, Lutter L, Dolinsky JL, Yang Y, Jiang YX, Boyer DR, Cheng X, Pi J, Zhang J, Lu J, Abskharon R, Yang S, Yu Z, Feigon J, Eisenberg DS [Pubmed: 40634605] [DOI: 10.1038/s41586-025-09244-z] |
1.5 TB | 3.1 Å | |
| 2026-06-21 | Submitochondrial particles from bovine heart [34199 multi-frame micrographs composed of 50 frames each in TIFF format] | Nakano A, Masuya T, Akisada S, Ishikawa-Fukuda M, Mitsuoka K, Miyoshi H, Murai M, Yokoyama K [Pubmed: 41844608] [DOI: 10.1038/s41467-026-70578-x] |
10.2 TB | 2.6 Å | |
| 2026-05-19 | Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - paranemic crossover triangle (PXT) origami [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 3.1 TB | 4.41 Å | |
| 2026-05-19 | Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - 5-helix tile (5HT) origami [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 3.0 TB | 6.06 Å | |
| 2026-06-15 | Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - 6-helix bundle (6HB) origami dimer [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 1.8 TB | 9.6 Å | |
| 2026-05-13 | Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - 6-helix bundle (6HB) origami monomer [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 628.8 GB | 9.33 Å | |
| 2026-05-19 | Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - 3-helix tile with fluorescent aptamers Broccoli and Pepper (3HT-BP) origami device made with 2'-Fluoro-modified pyrimidines (FY RNA), with dyes HBC620 and DFHBI-1T present [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 3.2 TB | 6.41 Å | |
| 2026-05-19 | Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - paranemic crossover triangle functionalized with a spike protein-binding aptamer (spike-PXT) origami device mixed with purified SARS-CoV-2 spike protein [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 4.7 TB | 2.78 - 6.92 Å | |
| 2026-05-13 | Cryo-EM raw movies of 2'-F-pyrimidine RNA origami - 'Traptamer' origami device with dye DFHBI-1T present [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, Hansen K, Zwergius NH, Andersen ES | 1.5 TB | 9.9 Å | |
| 2026-04-21 | Movies of alpha-hemolysin in the lipidic environment (Egg-PC/Chol with Hla) [3843 multi-frame micrographs composed of 20 frames each in MRC format] | Chatterjee A, Dutta S [Pubmed: 40640160] [DOI: 10.1038/s41467-025-61741-x] |
457.3 GB | 3.07 Å | |
| 2026-05-13 | CryoEM reconstruction of coxsackievirus B1 virus-like particle with VP4 deletion [8020 multi-frame micrographs composed of 40 frames each in EER format] | Levanova AA, Ahmad KLL, Gurianov S, Butcher SJ [Pubmed: 41888844] [DOI: 10.1186/s12929-026-01229-y] |
4.9 TB | 2.7 Å | |
| 2026-04-20 | Complex of RecF-RecO-RecR-DNA from Thermus thermophilus [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M [Pubmed: 37081315] [DOI: 10.1038/s41594-023-00967-z] |
3.2 TB | 3.05 - 6.09 Å | |
| 2026-04-20 | Movies of alpha-hemolysin in the lipidic environment (Egg-PC/SM with Hla) [6248 multi-frame micrographs composed of 20 frames each in MRC format] | Chatterjee A, Dutta S [Pubmed: 40640160] [DOI: 10.1038/s41467-025-61741-x] |
514.3 GB | 2.8 - 2.9 Å | |
| 2026-04-15 | Characterization of membrane structures regulating primary ciliogenesis by quantitative isotropic ultrastructure imaging [85 tilt series in TIFF format] | Lu QL, Harned AH, Narayan KN, Westlake CW | 427.3 MB | — | |
| 2026-04-20 | BG505.SOSIP.664.T332N gp140 trimer in complex with 44m bnAb [4916 multi-frame micrographs composed of 20 frames each in MRC format] | Dutta S [Pubmed: 37649696] [DOI: 10.1016/j.isci.2023.107579] |
733.3 GB | 4.4 Å | |
| 2026-04-20 | Movies of alpha-hemolysin in the lipidic environment (10PC/SM with Hla) [2663 multi-frame micrographs composed of 20 frames each in MRC format] | Chatterjee A, Dutta S [Pubmed: 40640160] [DOI: 10.1038/s41467-025-61741-x] |
259.2 GB | 2.6 Å | |
| 2026-04-20 | Movies of alpha-hemolysin in the lipidic environment (12PC with Hla) [4257 multi-frame micrographs composed of 20 frames each in MRC format] | Chatterjee A, Dutta S [Pubmed: 40640160] [DOI: 10.1038/s41467-025-61741-x] |
365.4 GB | 3.2 Å | |
| 2026-04-13 | alpha-hemolysin in the lipidic environment [3800 multi-frame micrographs composed of 20 frames each in MRC format] | Chatterjee A, Dutta S [Pubmed: 40640160] [DOI: 10.1038/s41467-025-61741-x] |
365.8 GB | 2.8 - 2.9 Å | |
| 2026-04-09 | Transcription co-inhibition alters drug resistance evolution and enhances Mycobacterium tuberculosis clearance from granulomas [14455 multi-frame micrographs composed of 50 frames each in TIFF format] | Barbara B, Lilic M, Campbell EA [Pubmed: 41339746] [DOI: 10.1038/s41564-025-02201-6] |
7.4 TB | 2.97 Å | |
| 2026-04-15 | CryoEM movies of Rabbit muscle Aldolase determined using a manually-operated plunging device in the presence of 0.25x SurfACT. [multiple data sets in EER and MRC formats] | Enos SE, Cook BD, Rahmani H, Narehood SM, Li Y, Kuschnerus IC, Redford HT, Dukakis P, Ji D, Bachochin MJ, Grotjahn DA, Herzik MA [Pubmed: 41889805] [DOI: 10.64898/2026.03.17.712260] |
831.6 GB | 2.18 - 2.38 Å | |
| 2026-04-15 | CryoEM movies of Rabbit muscle Aldolase determined using the TFS Vitrobot Mark IV in the presence of 1x SurfACT. [multiple data sets in EER and MRC formats] | Enos SE, Cook BD, Rahmani H, Narehood SM, Li Y, Kuschnerus IC, Redford HT, Dukakis P, Ji D, Bachochin MJ, Grotjahn DA, Herzik MA [Pubmed: 41889805] [DOI: 10.64898/2026.03.17.712260] |
1.0 TB | 1.98 - 2.16 Å | |
| 2026-04-16 | CryoEM movies of Rabbit muscle Aldolase determined using the TFS Vitrobot Mark IV in the presence of 0x SurfACT. [multiple data sets in EER and MRC formats] | Enos SE, Cook BD, Rahmani H, Narehood SM, Li Y, Kuschnerus IC, Redford HT, Dukakis P, Ji D, Bachochin MJ, Grotjahn DA, Herzik MA [Pubmed: 41889805] [DOI: 10.64898/2026.03.17.712260] |
344.7 GB | 1.97 - 2.25 Å |