Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some datasets are currently inaccessible or incomplete (marked as Incomplete dataset).
We are pleased to report that the following entries have been restored:
EMPIAR-10577 (New)We are still accepting requests for datasets you would like us to download first (email, inquiry).
We apologize for the inconvenience and appreciate your understanding.
EMPIAR-PDBj services will be suspended during the following period for a legally required inspection of electrical equipment.
During this period, the website and data downloads from EMPIAR-PDBj will be unavailable.
Please use EMPIAR-EBI instead.
We apologize for any inconvenience.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-08-25 |  |
FAK structure from single particle analysis of 2D crystals [multiple data sets in MRC, TIFF and MRCS formats] | Acebron I, Righetto RD, Biyani N, Chami M, Boskovic J, Stahlberg H, Lietha D [Pubmed: 32779739] [DOI: 10.15252/embj.2020104743] |
1.8 TB | 5.96 - 6.32 Å |
| 2020-03-10 |  |
Cryo-EM of GLP-1 receptor bound to TT-OAD2 non-peptidic agonist [multiple data sets in TIFF format] | Zhao P, Liang YL, Belousoff MJ, Deganutti G, Fletcher MM, Willard FS, Bell MG, Christe ME, Sloop KW, Inoue A, Truong TT, Clydesdale L, Furness SGB, Christopoulos A, Wang MW, Miller LJ, Reynolds CA, Danev R, Sexton PM, Wootten D [Pubmed: 31915381] [DOI: 10.1038/s41586-019-1902-z] |
6.2 TB | 3.0 Å |
| 2020-01-31 |  |
CryoEM dataset containing multiple conformations of the asymmetric αVβ8 integrin bound to two Fabs on a holey carbon grid (minimal preferred orientations) [multiple data sets in TIFF, MRC and MRCS formats] | Campbell MG, Cheng Y [Pubmed: 31955848] [DOI: 10.1016/j.cell.2019.12.030] |
882.1 GB | 3.51 Å |
| 2020-01-31 |  |
CryoEM dataset containing multiple conformations of the asymmetric αVβ8 integrin bound to latent TGF-β on a graphene oxide grid (preferred orientations) [multiple data sets in TIFF, MRC and MRCS formats] | Campbell MG, Cheng Y [Pubmed: 31955848] [DOI: 10.1016/j.cell.2019.12.030] |
2.2 TB | 2.87 - 3.6 Å |
| 2020-01-31 |  |
CryoEM dataset containing multiple conformations of the asymmetric αVβ8 integrin bound to latent TGF-β on a holey carbon grid (strongly preferred orientations) [multiple data sets in TIFF, MRC and MRCS formats] | Campbell MG, Cheng Y [Pubmed: 31955848] [DOI: 10.1016/j.cell.2019.12.030] |
1.2 TB | — |
| 2020-07-28 |  |
Cryo-EM structure of the formoterol-bound turkey beta1 adrenoceptor coupled to beta-arrestin-1 with bound Fab30 in lipid nanodisc [multiple data sets in TIFF and MRCS formats] | Lee Y, Tate CG [Pubmed: 32555462] [DOI: 10.1038/s41586-020-2419-1] |
4.0 TB | 3.3 Å |
| 2021-03-29 |  |
Multiple Genomic RNA-Coat Protein Contacts Play Vital Roles in the Assembly of Infectious Enterovirus-E [multiple data sets in MRC and MRCS formats] | Chandler-Bostock R, Mata CP, Bingham RJ, Dykeman EC, Meng B, Tuthill TJ, Rowlands DJ, Ranson NA, Twarock R, Stockley PG [Pubmed: 33370422] [DOI: 10.1371/journal.ppat.1009146] |
635.4 GB | 2.23 Å |
| 2020-03-02 |  |
Cryo-EM reconstruction of tau filaments extracted from the brains of three individuals with Corticobasal degeneration [multiple data sets in TIFF format] | Zhang W, Tarutani A, Newell KL, Murzin AG, Matsubara T, Falcon B, Vidal R, Garringer HJ, Shi Y, Ikeuchi T, Murayama S, Ghetti B, Hasegawa M, Goedert M, Scheres SHW [Pubmed: 32050258] [DOI: 10.1038/s41586-020-2043-0] |
2.8 TB | 3.0 - 3.2 Å |
| 2025-06-10 |  |
Cryo-ET of cryosections of S. pombe cells in G1 arrest and in G0 quiescence [20 tilt series in MRC format] | Tan ZY, Cai S, Paithankar SA, Liu T, Nie X, Shi J, Gan L [Pubmed: 40013339] [DOI: 10.1242/jcs.263654] |
439.8 GB | — |
| 2020-04-24 |  |
Rabbit muscle aldolase movies obtained using a Talos Arctica (200 kV) equipped with a K2 [3316 multi-frame micrographs composed of 44 frames each in TIFF format] | Wu M, Lander GC, Herzik MA [Pubmed: 32647824] [DOI: 10.1016/j.yjsbx.2020.100020] |
543.3 GB | 2.13 Å |
| 2020-04-24 |  |
Mouse heavy-chain apoferritin movies obtained using a Talos Arctica (200 kV) equipped with a K2 [1679 multi-frame micrographs composed of 90 frames each in TIFF format] | Wu M, Lander GC, Herzik MA [Pubmed: 32647824] [DOI: 10.1016/j.yjsbx.2020.100020] |
549.5 GB | 1.75 Å |
| 2020-10-09 |  |
Structure of two nucleosomes bridged by human PARP2 [multiple data sets in MRCS format] | Gaullier G, Morgan GP, Luger K [Pubmed: 33141820] [DOI: 10.1371/journal.pone.0240932] |
677.3 GB | 10.5 Å |
| 2019-12-20 |  |
Apo-state Streptavidin [multiple data sets in MRCS format] | Han Y, Fan X, Wang H, Zhao F, Tully CG, Kong J, Yao N, Yan N [Pubmed: 31879346] [DOI: 10.1073/pnas.1919114117] |
922.4 GB | 2.6 Å |
| 2020-07-03 |  |
Cryo-EM structure of RNF213 reveals a RING-type E3 with a dynein core and cysteine reactivity [multiple data sets in TIFF format] | Ahel J, Lehner A, Vogel A, Schleiffer A, Meinhart A, Haselbach D, Clausen T [Pubmed: 32573437] [DOI: 10.7554/eLife.56185] |
1.9 TB | 3.2 Å |
| 2019-12-20 |  |
Single Particle Cryo-EM Reconstructions of Human FACT in Complex with Partially Assembled Sub-nucleosomes [multiple data sets in TIFF, MRC and MRCS formats] | Liu YL, Zhou KZ, Zhang NZ, Wei HW, Tan YZT, Zhang ZZ, Carragher BC, Potter CSP, D'Arcy SD, Luger KL [Pubmed: 31775157] [DOI: 10.1038/s41586-019-1820-0] |
2.2 TB | 4.9 - 7.4 Å |
| 2019-10-30 |  |
Cryo-EM structure of the translocator of the outer mitochondrial membrane [2057 multi-frame micrographs composed of 49 frames each in TIFF format] | Araiso Y, Tsutsumi A, Qiu J, Imai K, Shiota T, Song J, Lindau C, Wenz LS, Sakaue H, Yunoki K, Kawano S, Suzuki J, Wischnewski M, Schutze C, Ariyama H, Ando T, Becker T, Lithgow T, Wiedemann N, Pfanner N, Kikkawa M, Endo T [Pubmed: 31600774] [DOI: 10.1038/s41586-019-1680-7] |
1.9 TB | 3.81 Å |
| 2020-02-28 |  |
Three-Dimensional Reconstructions of Mouse Circumvallate Taste Buds Using Serial Blockface Scanning Electron Microscopy: I. Cell Types and the Apical Region of the Taste Bud [1194 multi-frame micrographs composed of 1 frames each in TIFF format] | Yang R, Dzowo YK, Wilson CE, Russell RL, Kidd GJ, Salcedo E, Lasher RS, Kinnamon JC, Finger TE [Pubmed: 31587284] [DOI: 10.1002/cne.24779] |
184.9 GB | — |
| 2019-12-19 |  |
3.2 Å Single-Particle Cryo-EM Reconstruction of 49 kDa Membrane-Bound PfCRT Complexed with Fab [multiple data sets in MRCS and MRC formats] | Kim JK, Tan YZT, Wicht KJW, Erramilli SKE, Dhingra SKD, Okombo JO, Vendome JV, Hagenah LMH, Giacometti SIG, Warren ALW, Nosol KN, Roepe PDR, Potter CSP, Carragher BC, Kossiakoff AAK, Quick MQ, Fidock DAF, Mancia FM [Pubmed: 31776516] [DOI: 10.1038/s41586-019-1795-x] |
830.4 GB | 3.3 Å |
| 2021-05-28 |  |
CLEM/FIB-SEM Imaging of T Cells after the Formation of Signaling Microclusters at the Immunological Synapse [160 micrographs in TIFF format] | Narayan K | 26.6 MB | — |
| 2021-11-08 |  |
Hedgehog receptor Patched (PTCH1) in complex with a conformation selective nanobody TI23 [stack of 307652 particles in MRCS format] | Zhang Y, Lu WJ, Bulkley DP, Liang J, Ralko A, Han S, Roberts KJ, Li A, Cho W, Cheng Y, Manglik A, Beachy PA [Pubmed: 33139559] [DOI: 10.1073/pnas.2011560117] |
75.2 GB | 3.4 Å |
| 2019-10-07 |  |
Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
583.8 MB | — |
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [4490 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
273.8 GB | — |
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [4529 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
605.2 GB | — |
| 2019-10-07 |  |
Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
898.1 MB | — |
| 2020-03-04 |  |
Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy [1713 micrographs in MRC format] | Guerrero-Ferreira R, Taylor NM, Arteni AA, Kumari P, Mona D, Ringler P, Britschgi M, Lauer ME, Makky A, Verasdonck J, Riek R, Melki R, Meier BH, Böckmann A, Bousset L, Stahlberg H [Pubmed: 31815671] [DOI: 10.7554/eLife.48907] |
90.9 GB | 2.98 - 3.4 Å |
