Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-06-08 | Glutamine-stabilized filament form of Glutamine Synthetase under turnover conditions [8246 micrographs in MRC format] | Greene E, Muniz R, Yamamura H, Hoff SE, Bajaj P, Lee DJ, Thompson EM, Arada A, Lee GM, Bonomi M, Kollman JM, Fraser JS [Pubmed: 40631248] [DOI: 10.1101/2025.07.04.663231] |
724.0 GB | 2.19 Å | |
| 2026-06-08 | Time-resolved cryo-EM particle stacks [multiple data sets in MRC format] | Greene E, Muniz R, Yamamura H, Hoff SE, Bajaj P, Lee DJ, Thompson EM, Arada A, Lee GM, Bonomi M, Kollman JM, Fraser JS [Pubmed: 40631248] [DOI: 10.1101/2025.07.04.663231] |
8.9 TB | 2.03 Å | |
| 2026-06-03 | This is a TEST entry created the 03-06-2026 at 16:30:00 [stack of 1 particles in IMAGIC format] | Clementel DC | 145.4 MB | — | |
| 2026-06-09 | BtCap14 + 2'3'-cGAMP in amphipols [8475 micrographs in EER format] | Tak U, Whiteley AT [Pubmed: 41903528] [DOI: 10.1016/j.chom.2026.03.004] |
6.7 TB | 3.3 Å | |
| 2026-06-08 | Cryo Electron Microscopy micrographs of Inward-facing, ligand-free MRP2 [5100 multi-frame micrographs composed of 50 frames each in TIFF format] | Koide EK, Pietz HLP, Beltran JB, Chen JC [Pubmed: 39779684] [DOI: 10.1038/s41467-024-55810-w] |
3.0 TB | 3.62 Å | |
| 2026-06-09 | Structure of cGAS in complex with SPSB3-ELOBC [multiple data sets in MRC format] | Xu P, Liu Y, Liu C, Guey B, Li L, Melenec P, Ricci J, Ablasser A [Pubmed: 38418882] [DOI: 10.1038/s41586-024-07112-w] |
3.4 TB | 3.51 Å | |
| 2026-06-09 | Cryo-EM structure of Chikungunya virus asymmetric unit with Fab IM-CKV063 [14504 multi-frame micrographs composed of 40 frames each in MRC format] | Su GCS, Galaz-Montoya JG, Pintilie GP, Jin JJ, Chiu WC | 7.5 TB | 3.5 - 4.8 Å | |
| 2026-06-11 | Single particle cryo-EM of Staphylococcus aureus YhaM D193A hexamers in complex with double-stranded substrate RNA derived from hpf mRNA [15724 multi-frame micrographs composed of 60 frames each in EER format] | Mattingly JM, Tanquary JR, Dunham CM | 7.7 TB | 3.2 - 3.5 Å | |
| 2026-05-28 | Cryo-EM movies of MucR oligomers [4020 multi-frame micrographs composed of 60 frames each in MRC format] | Chaves-Sanjuan A, Nardini M [Pubmed: 39588759] [DOI: 10.1093/nar/gkae1104] |
2.3 TB | 3.8 Å | |
| 2026-06-02 | Structure of Adenovirus D10 [4271 multi-frame micrographs composed of 40 frames each in TIFF format] | Mundy RM, Waraich K, Bates EA, Rizkallah PJ, Baker AT, Young MT, Morris E, da Fonseca PCA, Bliss CM, Matthews D, Bhella D, Parker AL [Pubmed: 42048387] [DOI: 10.1371/journal.ppat.1014182] |
684.7 GB | 3.3 - 4.61 Å | |
| 2026-06-08 | In extracto cryo-EM reveals eEF2 as a major hibernation factor on 60S and 80S particles [24552 micrographs in MRC format] | Zahra Seraj XZ, Ximena Zottig XZ, Chun-Ying Huang CYH, Anna B Loveland ABL, Stephen Diggs SD, Emily Sholi ES [Pubmed: 41394757] [DOI: 10.7554/eLife.110114.2] |
2.1 TB | — | |
| 2026-05-31 | Raw data for single-particle cryo-EM analysis of P. aeruginosa PA3214 in complex with the C-terminal peptide of PA3213 [multiple data sets in TIFF format] | Giacometti SI, Coudray N, Bhabha G, Ekiert DC [DOI: 10.64898/2026.05.09.724024] |
2.8 TB | 2.7 - 12.0 Å | |
| 2026-05-26 | Raw data for single-particle cryo-EM analysis of soluble P. aeruginosa PA3214 [6463 multi-frame micrographs composed of 50 frames each in TIFF format] | Giacometti SI, Coudray N, Redler RL, Bhabha G, Ekiert DC [DOI: 10.64898/2026.05.09.724024] |
2.4 TB | 2.67 Å | |
| 2026-06-04 | Cryo Electron Microscopy micrographs of MRP2 bound to Leukotriene C4 [18196 multi-frame micrographs composed of 36 frames each in EER format] | Koide EK, Pietz HLP, Beltran JB, Chen JC [Pubmed: 39779684] [DOI: 10.1038/s41467-024-55810-w] |
9.3 TB | 2.75 Å | |
| 2026-06-10 | Engineered nanobody 1G1 bound to the acidic patch of the nucleosome [multiple data sets in TIFF and MRC formats] | Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK | 4.0 TB | 3.1 Å | |
| 2026-06-12 | Engineered nanobody 1B2 bound to the acidic patch of the nucleosome [multiple data sets in TIFF and MRC formats] | Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK | 4.9 TB | 3.17 Å | |
| 2026-06-02 | Structures of asymmetric mature particles of tick-borne encephalitis virus solved by SPA [13122 multi-frame micrographs composed of 40 frames each in TIFF format] | Fuzik T, Plevka P | 2.1 TB | 5.1 Å | |
| 2026-05-13 | Single particle raw data of falcilysin in the presence of MK-4815 [6764 multi-frame micrographs composed of 783 frames each in EER format] | LIN J.Q., Yan X, Lescar J [Pubmed: 39217277] [DOI: 10.1038/s42003-024-06774-6] |
1.9 TB | 2.7 - 3.2 Å | |
| 2026-05-20 | Cryo-EM structures of alpha5beta1 integrin in complex with NeoNectin [multiple data sets in TIFF and MRC formats] | Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG [Pubmed: 40489013] [DOI: 10.1002/adma.202500872] |
382.1 GB | 3.19 Å | |
| 2026-06-04 | An auto inhibitory loop in the MiDAC histone deacetylase complex [11093 multi-frame micrographs composed of 50 frames each in TIFF format] | Fairall L, Schwabe JWR [Pubmed: 41290615] [DOI: 10.1038/s41467-025-65472-x] |
2.3 TB | 2.75 - 2.92 Å | |
| 2026-05-18 | Raw data used for CS polymerase structure determination (CHSY3-CHPF) [12169 multi-frame micrographs composed of 66 frames each in TIFF format] | Dutta P, Cordeiro RL, Friedel-Arboleas M, Bourgeais M, Vallet SD, Weber M, Molinas M, Shu H, Gronset MNN, Miller RL, Boeri Erba E, Wild R [Pubmed: 41298522] [DOI: 10.1038/s41467-025-66787-5] |
2.3 TB | 3.0 Å | |
| 2026-05-13 | Single particle raw data of falcilysin in the absence of MK-4815 [18180 multi-frame micrographs composed of 765 frames each in EER format] | LIN J.Q., Yan X, Lescar J [Pubmed: 39217277] [DOI: 10.1038/s42003-024-06774-6] |
5.1 TB | 3.1 - 3.5 Å | |
| 2026-05-05 | Raw multi-frame images of SUR1/Kir6.2 ATP-sensitive potassium channel in the presence of Aekatperone and ATP [31513 multi-frame micrographs composed of 74 frames each in TIFF format] | Driggers CM, Elsheikh A, Shyng SL [Pubmed: 40135739] [DOI: 10.7554/eLife.103159] |
16.3 TB | 4.1 Å | |
| 2026-05-05 | 33,592 raw cryo-EM images of B. megaterium gas vesicles at 1.518 A per pixel [multiple data sets in EER, MRC and JPEG formats] | Huber ST, Jakobi AJ [Pubmed: 36868215] [DOI: 10.1016/j.cell.2023.01.041] |
16.7 TB | 3.2 Å | |
| 2026-05-31 | Selective silencing of antibiotic-tethered ribosomes as a resistance mechanism against aminoglycosides [multiple data sets in MRC and MRCS formats] | Ghosh Dastidar N, Freyer N, Petrychenko V, Schwarzer AC, Peng BZ, Samatova E, Kothe C, Schmidt M, Peske F, Politi A, Urlaub H, Fischer N, Rodnina MV, Wohlgemuth I [Pubmed: 41162373] [DOI: 10.1038/s41467-025-65298-7] |
1.5 TB | 2.53 - 4.33 Å |