Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-05-10 | Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in nanodiscs [9336 multi-frame micrographs composed of 60 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
820.1 GB | 3.4 Å | |
| 2024-05-01 | Structure of human calcium-sensing receptor in complex with Gi3 protein in nanodiscs [16504 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
1.4 TB | 3.8 Å | |
| 2024-05-01 | Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in detergent [16017 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
1.4 TB | 3.5 Å | |
| 2024-05-10 | Structure of human calcium-sensing receptor in complex with miniGi1 protein in detergent [15713 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
1.3 TB | 3.6 Å | |
| 2024-05-01 | Structure of human calcium-sensing receptor in complex with chimeric Gs (miniGis) protein in nanodiscs [29091 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
2.5 TB | 3.6 Å | |
| 2026-07-02 | Cryo-electron microscopy of Herelleviridae phage 812 proheads [21755 multi-frame micrographs composed of 40 frames each in TIFF format] | Zlatohurska M, Prochazkova M, Cienikova Z, Fuzik T, Plevka P | 4.4 TB | 3.0 - 3.2 Å | |
| 2018-07-27 | Human apo-ferritin reconstructed in RELION-3.0 [1255 multi-frame micrographs composed of 40 frames each in TIFF format] | Zivanov J, Nakane T, Hagen WJH, Scheres SHW [Pubmed: 30412051] [DOI: 10.7554/eLife.42166] |
191.5 GB | 1.65 Å | |
| 2021-02-10 | Cryo EM strutcture of the full-length WzmWzt ABC transporter required for lipid-linked O antigen transport [5938 multi-frame micrographs composed of 31 frames each in TIFF format] | Zimmer J, Caffalette CA [Pubmed: 33443152] [DOI: 10.1073/pnas.2016144118] |
2.2 TB | 3.6 Å | |
| 2026-07-12 | Single-particle Cryo Electron Microscopy of Human Cytomegalovirus Protease Bound to an Inhibitory Antibody Fragment [multiple data sets in EER and MRC formats] | Zimanyi M, Hulce KR, Bohn M, Norman J, Rohweder PJ, Cheng Y, Craik CS, Detomasi TC [DOI: 10.1101/2025.10.17.683123] |
7.4 TB | 2.57 - 2.7 Å | |
| 2024-09-03 | CryoEM Structure of the human Trace Amine-Associated Receptor 1 bound to Ro5256390 [7618 micrographs in MRC format] | Zilberg G, Parpounas AK, Warren AL, Yang S, Wacker D [Pubmed: 38168118] [DOI: 10.1038/s41467-023-44601-4] |
668.9 GB | 3.35 Å | |
| 2025-07-31 | Cryoelectron microscopy image of wild-type Escherichia coli cell [1 micrographs in MRC format] | Zietek M, Miguel A, Shi H, Khusainov I, Asmar A, Ram S, Wartel M, Sueki A, Schorb M, Goulian M, Collet J-F, Beck M, Huang KC, Typas A | 657.6 MB | — | |
| 2025-07-21 | Cryoelectron microscopy image of MreB R193C Escherichia coli cell [1 micrographs in MRC format] | Zietek M, Miguel A, Shi H, Khusainov I, Asmar A, Ram S, Wartel M, Sueki A, Schorb M, Goulian M, Collet J-F, Beck M, Huang KC, Typas A | 710.8 MB | — | |
| 2025-07-16 | Single particle cryo-EM dataset of sarkosyl-insoluble fraction from tg-SwDI mouse mouse brain tissue containing amyloid-beta fibrils [25662 multi-frame micrographs composed of 700 frames each in EER format] | Zielinski M, Peralta Reyes FS, Gremer L, Schemmert S, Frieg B, Schäfer LU, Willuweit A, Donner L, Elvers M, Nilsson LNG, Syvänen S, Sehlin D, Ingelsson M, Willbold D, Schröder GF [Pubmed: 37973869] [DOI: 10.1038/s41593-023-01484-4] |
11.2 TB | 3.3 - 4.2 Å | |
| 2025-10-29 | Cryo-EM of Azo-ffsy nanofiber (+ALP) [17413 multi-frame micrographs composed of 40 frames each in TIFF format] | Zia A, Wang F [Pubmed: 39255453] [DOI: 10.1021/jacs.4c06775] |
3.8 TB | 2.8 Å | |
| 2025-07-30 | Cryo-EM of Azo-ffspy nanofiber (no ALP) [5709 multi-frame micrographs composed of 40 frames each in TIFF format] | Zia A, Wang F [Pubmed: 39255453] [DOI: 10.1021/jacs.4c06775] |
1.2 TB | 3.0 Å | |
| 2018-07-18 | Nucleotide-Driven Triple-State Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome [multiple data sets in MRC and MRCS formats] | Zhu Y, Wang WL, Mao Y [Pubmed: 29636472] [DOI: 10.1038/s41467-018-03785-w] |
2.8 TB | 3.5 - 7.0 Å | |
| 2020-11-06 | Serial cryoFIB/SEM reveals cytoarchitectural disruptions in Leigh syndrome patient cells [multiple data sets in TIFF format] | Zhu Y, Sun D, Schertel A, Fu X, Gwo P, Watson A, Zanetti-Domingues LC, Marisa L. Martin-Fernandez ML, Freyberg Z, Zhang P [Pubmed: 33096015] [DOI: 10.1016/j.str.2020.10.003] |
17.3 GB | — | |
| 2026-09-11 | STA structure of CA hexamer from HIV-1 CA-NC tube [56 tilt series in MRC format] | Zhu Y, Rey SJ, Shen J, Perilla RJ, Zhang P [DOI: 10.64898/2026.05.07.723526] |
140.6 GB | 4.9 Å | |
| 2026-09-11 | CryoET STA structure of CA hexamer from HIV-1 CA-NC tube in complex with Myxovirus resistance protein B (MxB, also designated Mx2) N-terminus 1-35 [53 tilt series in MRC format] | Zhu Y, Rey SJ, Shen J, Perilla RJ, Zhang P [DOI: 10.64898/2026.05.07.723526] |
175.3 GB | 4.4 Å | |
| 2026-09-21 | CryoEM Structure of HIV-1 CA hexamer from CA-NC tube in complex with Myxovirus resistance protein B (MxB, also designated Mx2) N-terminus 1-35 [19785 micrographs in MRC format] | Zhu Y, Rey SJ, Shen J, Perilla RJ, Zhang P [DOI: 10.64898/2026.05.07.723526] |
1.7 TB | 2.77 Å | |
| 2022-06-17 | Single particle cryogenic electron micrographs of tetrahymena mitochondrial electron transport chain complexes [multiple data sets in TIFF and MRC formats] | Zhou L, Guo F, Letts JA [Pubmed: 35357889] [DOI: 10.1126/science.abn7747] |
7.8 TB | 2.6 Å | |
| 2021-06-09 | 200kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.65 A [8 diffraction images in SMV format] | Zhou H, Luo F, Luo Z, Li D, Liu C, Li X [Pubmed: 31334636] [DOI: 10.1021/acs.analchem.9b01162] |
9.5 GB | 0.65 Å | |
| 2021-06-09 | 120kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.60 A [8 diffraction images in SMV format] | Zhou H, Luo F, Luo Z, Li D, Liu C, Li X [Pubmed: 31334636] [DOI: 10.1021/acs.analchem.9b01162] |
9.2 GB | 0.6 Å | |
| 2020-12-02 | Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.0 [1069 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
349.6 GB | 2.93 Å | |
| 2020-12-02 | Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.4 [1183 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
208.9 GB | 2.76 Å |