Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-11-18 |  |
2.05 angstrom resolution structure determination of sulfur oxygenase reductase using 200kV cryo-EM [2558 multi-frame micrographs composed of 50 frames each in MRC format] | Moriya T, Adachi N, Sato Y, Arakawa T, Kawasaki M, Yamada C, Fushinobu S, Senda T [Pubmed: 32775998] [DOI: 10.1016/j.yjsbx.2020.100030] |
1.7 TB | 2.05 - 2.24 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to SLC31 [multiple data sets in MRC and TIFF formats] | Seiple I, Pellegrino J, Fraser J, Lee DJ | 3.6 TB | 2.05 Å |
| 2020-11-23 |  |
CryoEM structure of EPYC1(106-135) peptide-bound Rubisco [13727 multi-frame micrographs composed of 60 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
5.8 TB | 2.06 Å |
| 2026-04-15 |  |
CryoEM movies of Azotobacter vinelandii MoFeP determined using the SPT Labtech chameleon in the presence of 0.25x SurfACT. [multiple data sets in EER and MRC formats] | Enos SE, Cook BD, Rahmani H, Narehood SM, Li Y, Kuschnerus IC, Redford HT, Dukakis P, Ji D, Bachochin MJ, Grotjahn DA, Herzik MA [Pubmed: 41889805] [DOI: 10.64898/2026.03.17.712260] |
808.0 GB | 2.06 - 2.16 Å |
| 2023-02-28 |  |
GroEL on EG-grid stored for 3 months after graphene oxidation [1209 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
217.8 GB | 2.06 Å |
| 2026-05-01 |  |
Single-particle cryo-EM dataset of H. neapolitanus CsoSCA in reducing conditions (inactive) [multiple data sets in TIFF and MRC formats] | Gaullier G, Vogiatzi N, Blikstad C [DOI: 10.64898/2026.04.02.716132] |
1.3 TB | 2.06 - 2.27 Å |
| 2023-12-04 |  |
Single particle cryo-EM dataset of homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum in complex with the product succinyl-CoA [11827 multi-frame micrographs composed of 50 frames each in TIFF format] | Yang L, Mechaly A, Bellinzoni M [Pubmed: 37563123] [DOI: 10.1038/s41467-023-40253-6] |
4.0 TB | 2.07 Å |
| 2022-02-24 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 1 [331 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
476.1 GB | 2.07 Å |
| 2021-05-25 |  |
EER movies of human light chain apoferritin [multiple data sets in EER format] | Guo H, Franken E, Deng Y, Benlekbir S, Singla Lezcano G, Janssen B, Yu L, Ripstein ZA, Tan YZ, Rubinstein JL [Pubmed: 32939278] [DOI: 10.1107/S205225252000929X] |
642.1 GB | 2.07 - 3.3 Å |
| 2024-06-13 |  |
2.08A Apoferritin Structure Solved Using an Indirect Scintillator-Coupled CMOS Detector at 300 kV [1893 multi-frame micrographs composed of 23 frames each in MRCS format] | Aramaki S, Yoshida Y, Tanihara T, Oyama K, Otsuki K, Terada Y, Matsunaga N, Ohdo S, Mayanagi K | 6.3 TB | 2.08 Å |
| 2025-12-15 |  |
Cryo-EM movies of RNA bound human PNPase in loading state [20390 multi-frame micrographs composed of 59 frames each in TIFF format] | Unseld O, Das H [DOI: 10.1093/nar/gkaf1296] |
5.3 TB | 2.08 - 2.65 Å |
| 2024-11-08 |  |
Cryo-electron microscopy of Avidin [14206 multi-frame micrographs composed of 623 frames each in EER format] | Nazarov S, Beckert Dominique B, Myasnikow A | 3.4 TB | 2.08 Å |
| 2021-02-05 |  |
High-resolution SARS-CoV-2 ORF3a dimer in an MSP1E3D1 lipid nanodisc [multiple data sets in EER format] | Kern DM, Hoel CM, Kotecha A, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
3.2 TB | 2.08 Å |
| 2026-05-01 |  |
Single-particle cryo-EM dataset of H. neapolitanus CsoSCA C283A/C284A inactive mutant [multiple data sets in TIFF and MRC formats] | Gaullier G, Vogiatzi N, Blikstad C [DOI: 10.64898/2026.04.02.716132] |
1.7 TB | 2.08 - 2.22 Å |
| 2023-02-28 |  |
GroEL on hydrophilized graphene grid (low particle density) [6149 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
1.1 TB | 2.08 Å |
| 2024-11-08 |  |
Cryo-EM structure of the gastric proton pump [multiple data sets in TIFF format] | Abe K, Yokoshima S, Yoshimori A [Pubmed: 37726448] [DOI: 10.1038/s42003-023-05334-8] |
7.3 TB | 2.08 - 2.26 Å |
| 2025-06-30 |  |
CryoEM movies of the catalytic subunit of Mo-nitrogenase (MoFeP) from Azotobacter vinelandii in the presence of 20 mM sodium dithionite under Al's oil [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.3 TB | 2.08 - 2.19 Å |
| 2025-06-30 |  |
CryoEM movies of the catalytic subunit of Mo-nitrogenase (MoFeP) from Azotobacter vinelandii in the presence of 60 mM sodium dithionite under Al's oil [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.3 TB | 2.08 - 2.19 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to compound streptogramin A analog 3336 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.4 TB | 2.09 Å |
| 2023-02-28 |  |
GroEL on hydrophilized graphene grid (high particle density) [700 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
133.7 GB | 2.09 Å |
| 2022-07-22 |  |
Structural conservation among variants of the SARS-CoV-2 spike postfusion bundle [multiple data sets in TIFF format] | Yang K, Brunger AT [Pubmed: 36940324] [DOI: 10.1073/pnas.2300360120] |
32.4 TB | 2.09 - 2.52 Å |
| 2024-02-13 |  |
Single-Particle Cryo-EM of AAV2 at Various Tilts [multiple data sets in MRCS and MRC formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
730.4 GB | 2.1 - 2.2 Å |
| 2019-07-29 |  |
Movies of horse spleen apoferritin on multifunctional ultrastable graphene supports for electron cryomicroscopy [480 multi-frame micrographs composed of 38 frames each in MRCS format] | Naydenova K, Peet MJ, Russo CJ [Pubmed: 31127045] [DOI: 10.1073/pnas.1904766116] |
570.0 GB | 2.1 Å |
| 2022-11-15 |  |
2.1 Å resolution structure of β-galactosidase obtained from Glacios equipped with Falcon 3 [multiple data sets in TIFF format] | Merk A, Darling JE, Grisshammer R, Ognjenović J | 4.8 TB | 2.1 Å |
| 2026-03-24 |  |
Single particle cryo-EM dataset of the light-driven sodium pump ErNaR prepared by jet vitrification [13007 multi-frame micrographs composed of 50 frames each in EER format] | Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ [Pubmed: 41332690] [DOI: 10.1101/2025.11.21.689681] |
3.7 TB | 2.1 Å |
