Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-07-28 | Cryo-EM micrographs of a near fully-activated intermediate A2AR-mini-Gαβγ complex [8875 multi-frame micrographs composed of 79 frames each in TIFF format] | Bi M, Wang X, Wang J, Xu J, Sun W, Adediwura VA, Miao Y, Cheng Y, Ye L [Pubmed: 39875358] [DOI: 10.1038/s41467-025-56434-4] |
2.4 TB | 2.63 - 3.36 Å | |
| 2026-07-20 | Cryo-EM structure of SARS-CoV-2 spike protein in complex with human neutralizing antibody WRAIR-2008 [multiple data sets in MRC format] | Jensen JLJ, Thomas PVT, Joyce MGJ [Pubmed: 40882161] [DOI: 10.1128/mbio.01036-25] |
928.7 GB | 3.23 Å | |
| 2026-08-05 | CryoEM movies of Mo-nitrogenase and FeSII from Azotobacter vinelandii in presence of oxygen [multiple data sets in EER and MRC formats] | Narehood SM, Cook BD, Srisantitham S, Eng VH, Shiau AA, McGuire KL, Britt RD, Herzik Jr MA, Tezcan FA [Pubmed: 39779844] [DOI: 10.1038/s41586-024-08311-1] |
4.9 TB | 2.27 - 3.94 Å | |
| 2026-07-29 | MPNN-RFdiff designed RNA molecule [15834 multi-frame micrographs composed of 1116 frames each in EER format] | Hingey JH, Spellmon NS, Favor AF, Kubaney AK, Baker DB, Haack DBH, Rudolfs BR, Mancino AM, Yu ZY, Toor NT, Das RD | 6.3 TB | 4.8 Å | |
| 2026-07-29 | Struct2SeQ designed RNA molecule [17275 multi-frame micrographs composed of 1017 frames each in EER format] | Mancino AM, Hingey JH, He SH, Haack DBH, Rudolfs BR, Spellmon NS, Yu ZY, Toor NT, Das RD | 6.5 TB | 4.7 Å | |
| 2026-09-21 | MPNN-fixbb designed RNA molecule [12594 multi-frame micrographs composed of 1116 frames each in EER format] | Haack DBH, Spellmon NS, Favor AF, Kubaney AK, Baker DB, Rudolfs BR, Hingey JH, Mancino AM, Yu ZY, Toor NT, Das RD [Pubmed: 42658941] [DOI: 10.1126/science.aeg6829] |
5.4 TB | 4.0 Å | |
| 2026-07-29 | gRNAde designed RNA molecule [10689 multi-frame micrographs composed of 1134 frames each in EER format] | Spellmon NS, Haack DBH, Joshi CJ, Rudolfs BR, Hingey JH, Mancino AM, Yu ZY, Toor NT, Das RD | 4.4 TB | 2.9 Å | |
| 2026-07-13 | Cryo electron micrographs of 3-methylcrotonyl-CoA carboxylase and its variable α-Cap Assemblies in Legionella pneumophila [31641 micrographs in MRC format] | Durie CL [Pubmed: 41509382] [DOI: 10.64898/2025.12.22.694428] |
988.8 GB | 2.13 - 2.68 Å | |
| 2026-07-10 | Cryo Electron Microscopy micrographs of multidrug resistance-associated protein 2 (MRP2) EQ Mutant bound to ATP [7532 multi-frame micrographs composed of 50 frames each in TIFF format] | Koide EK, Pietz HLP, Beltran JB, Chen JC [Pubmed: 39779684] [DOI: 10.1038/s41467-024-55810-w] |
4.0 TB | 3.4 - 3.41 Å | |
| 2026-07-24 | Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex [multiple data sets in TIFF and MRC formats] | Pelea O., Fernandez Carrera J., Gerecke S. E., Chanez C., Jinek M. [Pubmed: 41642947] [DOI: 10.1126/science.adz1884] |
1.2 TB | 2.81 Å | |
| 2026-09-03 | Cryo-electron tomography of functionally validated synapses in human induced neurons [multiple data sets in MRC format] | Sun RS | 164.1 GB | — | |
| 2026-07-14 | Stomatin encapsulates aquaporin-1 and urea transporter-B in the erythrocyte membrane [multiple data sets in TIFF and MRC formats] | Vallese F, Clarke OB [Pubmed: 41921000] [DOI: 10.1126/sciadv.aec1721] |
3.6 TB | 2.0 Å | |
| 2026-10-02 | P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in LMNG detergent [multiple data sets in TIFF format] | Hamaguchi-Suzuki N, Adachi N, Moriya T, Yasuda S, Kawasaki M, Suzuki K, Ogasawara S, Anzai N, Senda T, Murata T [Pubmed: 38579618] [DOI: 10.1016/j.bbrc.2024.149855] |
2.1 TB | 2.49 - 2.54 Å | |
| 2026-10-02 | JMV449-NTSR1-Gi in 8 seconds following the GTP addition [12138 multi-frame micrographs composed of 48 frames each in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
2.7 TB | 3.01 - 3.38 Å | |
| 2026-08-04 | JMV449-NTSR1-Gi in 15 seconds following the GDP addition [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
3.3 TB | 2.85 - 3.14 Å | |
| 2026-10-02 | JMV449-NTSR1-Gq nucleotide free [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
2.5 TB | 2.24 Å | |
| 2026-07-01 | SBF-SEM analysis of atg18-mNG:loxP parasite architecture [multiple data sets in DM3 format] | Schmitz Y, Sengupta M, Schneider C, Ziesmann T, Hellmold F, Distler U, Reimer R, Matz JM [DOI: 10.64898/2026.04.14.718606] |
108.7 GB | — | |
| 2026-07-01 | Full body vEM stack of the 2-day-old Platynereis dumerilii larva [6400 multi-frame micrographs composed of 1 frames each in TIFF format] | Shahidi R | 37.1 TB | — | |
| 2026-07-01 | STING mutants in detergent LMNG/CHS [multiple data sets in MRC format] | Xu P [Pubmed: 42343134] [DOI: 10.1038/s41586-026-10685-3] |
2.3 TB | 2.86 - 3.31 Å | |
| 2026-07-01 | Coordinated phase separation and phase transition underlie synaptic ribbon condensate formation and plasticity [2 multi-frame micrographs composed of 288 frames each in TIFF format] | Liu YL, Wang XW, Zheng TZ, Niu FN, Sun RS, Yang CY, Xu SX, Zhao ZZ, Shen ZS, Huang WH, Wang XW, Liu KL, Cai SC, Zhang MZ, Wei ZW [DOI: 10.15302/vita.2026.05.0033] |
7.1 GB | — | |
| 2026-06-29 | Cryo electron micrographs of activated disease resistance protein NRC3 from Solanum lycopersicum in complex with Phytophthora infestans effector AVRcap1b [7555 multi-frame micrographs composed of 50 frames each in TIFF format] | Seager BA, Kamoun S, Madhuprakash J [Pubmed: 42247517] [DOI: 10.1126/sciadv.aeb1931] |
1.5 TB | 3.01 Å | |
| 2026-08-07 | Bovine lactoferrin particles in TBS for energy landscape analysis. [8443 multi-frame micrographs composed of 64 frames each in TIFF format] | Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T [DOI: 10.1117/12.3119418] |
2.4 TB | 7.97 Å | |
| 2026-08-07 | Bovine lactoferrin single particles in water, PDB-templated for uniform orientation. [4828 multi-frame micrographs composed of 64 frames each in TIFF format] | Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T [DOI: 10.1117/12.3119418] |
1.5 TB | 3.83 Å | |
| 2026-07-27 | FIB-SEM of NF54-DiCre-PfOGREloxP parasites with OGRE KO [350 multi-frame micrographs composed of 1 frames each in TIFF format] | Dvorin JD, Navarro FM, Wagner E, Kraemer S, Gurung P [DOI: 10.1038/s41467-026-77586-x] |
1.2 GB | — | |
| 2026-06-29 | Cryo electron micrographs of activated disease resistance protein NRC3 from Solanum lycopersicum [6150 multi-frame micrographs composed of 50 frames each in TIFF format] | Seager BA, Kamoun S, Madhuprakash J [Pubmed: 42247517] [DOI: 10.1126/sciadv.aeb1931] |
1.3 TB | 2.85 Å |