Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some datasets are currently inaccessible or incomplete (marked as Incomplete dataset).
We are pleased to report that the following entries have been restored:
EMPIAR-10577 (New)We are still accepting requests for datasets you would like us to download first (email, inquiry).
We apologize for the inconvenience and appreciate your understanding.
EMPIAR-PDBj services will be suspended during the following period for a legally required inspection of electrical equipment.
During this period, the website and data downloads from EMPIAR-PDBj will be unavailable.
Please use EMPIAR-EBI instead.
We apologize for any inconvenience.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2019-04-18 |  |
Single particle cryo electron tomography of mouse protocadherin gamma B6 [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
384.1 GB | 35.0 Å |
| 2019-04-18 |  |
CryoET of mouse protocadherin gamma B6 on membranes (without energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
363.4 GB | — |
| 2019-04-18 |  |
CryoET of mouse protocadherin gamma B6 on membranes (with energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Carragher B [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
411.3 GB | — |
| 2019-04-18 |  |
CryoET of cis-mutated mouse protocadherin gamma B6 on membranes [multiple data sets in MRC format] | Brasch J, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
379.7 GB | — |
| 2024-07-04 |  |
Tomograms and the raw 2d tilt series of ER-ER junctions of HeLa cells in interphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
304.4 GB | — |
| 2024-07-04 |  |
Tomograms and the raw 2d tilt series of ER-ER/nuclear envelope junctions of HeLa cells in late anaphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
305.3 GB | — |
| 2024-07-04 |  |
Tomograms and the raw 2d tilt series of ER-nuclear envelope junctions of HeLa cells in interphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
434.0 GB | — |
| 2020-10-28 |  |
The α-synuclein hereditary mutation E46K unlocks a more stable, pathogenic fibril structure [4919 multi-frame micrographs composed of 30 frames each in TIFF format] | Boyer DR, Li B, Sun C, Fan W, Zhou K, Hughes MP, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 32015135] [DOI: 10.1073/pnas.1917914117] |
897.9 GB | 2.5 Å |
| 2021-03-03 |  |
Cryo electron microscopy of alpha-synuclein H50Q fibrils [3577 multi-frame micrographs composed of 30 frames each in MRC format] | Boyer DR, Li B, Sun C, Fan W, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 31695184] [DOI: 10.1038/s41594-019-0322-y] |
595.3 GB | 3.3 Å |
| 2022-05-26 |  |
Cryo TEM single particle dataset of purified ChAdOx1/ADZ-1222 [2875 multi-frame micrographs composed of 40 frames each in TIFF format] | Boyd RJ, Baker AB [Pubmed: 34851659] [DOI: 10.1126/sciadv.abl8213] |
1.0 TB | 3.07 Å |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to the Fdx and upstream fork DNA [multiple data sets in MRC format] | Boyaci H, Chen J, Lilic M, Palka M, Mooney RA, Landick R, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
2.0 TB | 3.38 Å |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to an inhibitor corallopyronin and de novo melted AP3 promoter DNA [multiple data sets in TIFF format] | Boyaci H, Chen J, Jansen R, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
1.8 TB | 3.55 Å |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to the de novo melted AP3 promoter DNA [8579 multi-frame micrographs composed of 50 frames each in MRC format] | Boyaci H, Chen J, Jansen R, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
1.8 TB | 3.6 Å |
| 2022-01-12 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA/Fdx [401 multi-frame micrographs composed of 50 frames each in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
220.5 GB | 3.38 Å |
| 2022-01-12 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA [1381 multi-frame micrographs composed of 50 frames each in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
838.9 GB | 3.38 Å |
| 2022-01-17 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to an inhibitor corallopyronin and us-fork DNA [multiple data sets in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
2.3 TB | 3.55 Å |
| 2022-09-23 |  |
Single particle reconstruction of the MAPK p38alpha in complex with its activating MAP2K MKK6 [multiple data sets in TIFF format] | Bowler MW, Juyoux P, Pellegrini E [Pubmed: 37708276] [DOI: 10.1126/science.add7859] |
4.0 TB | 4.0 Å |
| 2015-08-28 |  |
Cryo electron microscopy of YnaI [multiple data sets in MRC format] | Bottcher B, Prazak V, Rasmussen A, Black SS, Rasmussen T [Pubmed: 26256535] [DOI: 10.1016/j.str.2015.06.023] |
107.6 GB | 12.6 Å |
| 2025-01-29 |  |
Volume electron microscopy of APEX2-DAB labeled thalamocortical projections in visual cortex L4 [4 reconstructed volumes in TIFF format] | Bosworth AP, Weiser Novak S, Manor U, Allen NJ [DOI: 10.1101/2023.03.02.529949] |
199.8 GB | — |
| 2025-04-24 |  |
Single particle cryo-EM of ASCT2 in lipid nanodiscs with bound glutamine and Na+ ions [multiple data sets in TIFF format] | Borowska AM, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 39095408] [DOI: 10.1038/s41467-024-50888-8] |
3.4 TB | 2.6 - 2.9 Å |
| 2025-04-24 |  |
Single particle cryo-EM of ASCT2 in lipid nanodiscs under Na+-depleted conditions [multiple data sets in TIFF format] | Borowska AM, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 39095408] [DOI: 10.1038/s41467-024-50888-8] |
715.2 GB | 2.9 - 3.0 Å |
| 2022-04-19 |  |
Cryo-EM micrographs of BMV TLS RNA [multiple data sets in MRC format] | Bonilla SL, Sherlock ME, MacFadden A, Kieft JS [Pubmed: 34793227] [DOI: 10.1126/science.abe8526] |
6.7 TB | 4.3 Å |
| 2023-08-18 |  |
Mouse heavy chain apoferritin in vitreous ice after plunge-freezing [4745 multi-frame micrographs composed of 784 frames each in EER format] | Bongiovanni G, Harder OF, Voss JM, Drabbels M, Lorenz UJ [Pubmed: 37219589] [DOI: 10.1107/S2059798323003431] |
1023.1 GB | 1.61 Å |
| 2024-02-19 |  |
Mouse heavy chain apoferritin in vitreous ice after laser-melting and revitrification [10421 multi-frame micrographs composed of 784 frames each in EER format] | Bongiovanni G, Harder OF, Voss JM, Drabbels M, Lorenz UJ [Pubmed: 37219589] [DOI: 10.1107/S2059798323003431] |
2.5 TB | 1.59 Å |
| 2023-08-18 |  |
Mouse heavy chain apoferritin in plunge-frozen vitreous ice [10145 multi-frame micrographs composed of 553 frames each in EER format] | Bongiovanni G, Harder OF, Drabbels M, Lorenz UJ [Pubmed: 36438663] [DOI: 10.3389/fmolb.2022.1044509] |
1.9 TB | 1.47 Å |
