Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-04-24 | Tau Paired Helical Filament from Alzheimer's Disease before addition of D-peptide disaggregants [13239 multi-frame micrographs composed of 40 frames each in TIFF format] | Hou K, Ge P, Sawaya MR, Lutter L, Dolinsky JL, Yang Y, Jiang YX, Boyer DR, Cheng X, Pi J, Zhang J, Lu J, Abskharon R, Yang S, Yu Z, Feigon J, Eisenberg DS [Pubmed: 40634605] [DOI: 10.1038/s41586-025-09244-z] |
5.6 TB | 3.5 Å | |
| 2022-11-21 | Tau Paired Helical Filament from Alzheimer's Disease incubated 1 hr. with EGCG [3890 multi-frame micrographs composed of 48 frames each in TIFF format] | Seidler PM, Murray KA, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 36114178] [DOI: 10.1038/s41467-022-32951-4] |
3.7 TB | 3.3 Å | |
| 2026-04-22 | Tau Paired Helical Filament from Alzheimer's Disease incubated with D-peptide D-TLKIVWI [multiple data sets in EER format] | Hou K, Ge P, Sawaya MR, Lutter L, Dolinsky JL, Yang Y, Jiang YX, Boyer DR, Cheng X, Pi J, Zhang J, Lu J, Abskharon R, Yang S, Yu Z, Feigon J, Eisenberg DS [Pubmed: 40634605] [DOI: 10.1038/s41586-025-09244-z] |
1.5 TB | 3.1 Å | |
| 2022-11-21 | Tau Paired Helical Filament from Alzheimer's Disease incubated with EGCG for 3 hours [6406 multi-frame micrographs composed of 30 frames each in MRCS format] | Seidler PM, Murray KA, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 36114178] [DOI: 10.1038/s41467-022-32951-4] |
1.7 TB | 3.8 Å | |
| 2022-11-21 | Tau Paired Helical Filament from Alzheimer's Disease not incubated with EGCG [2651 multi-frame micrographs composed of 48 frames each in TIFF format] | Seidler PM, Murray KA, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 36114178] [DOI: 10.1038/s41467-022-32951-4] |
2.5 TB | 3.4 Å | |
| 2023-11-07 | Tau filaments from the cellular fraction of Alzheimer's disease patient brain [12117 multi-frame micrographs composed of 40 frames each in TIFF format] | Ryskeldi-Falcon BR-F, Behr TSB [Pubmed: 37163117] [DOI: 10.1101/2023.04.30.537820] |
1.9 TB | 3.27 Å | |
| 2023-11-13 | Test subset: In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling [18 tilt series in MRC format] | Kelley R, Zhang X, Obr M, Khavnekar S, Righetto R, Waltz F, Wietrzynski W, Michael A, Tagiltsev G, Beck F, Zhong E, Wan W, Briggs J, Plitzko J, Engel B, Kotecha A [Pubmed: 37613825] [DOI: 10.1093/micmic/ozad067.480] |
293.7 GB | — | |
| 2020-12-02 | Tetrameric Ptch1 complexed with ShhNp [5198 multi-frame micrographs composed of 32 frames each in MRC format] | Qian H, Yan N [Pubmed: 31127104] [DOI: 10.1038/s41467-019-10234-9] |
2.5 TB | 3.6 - 6.8 Å | |
| 2020-06-19 | Tetrameric SARS-CoV-2 ORF3a in a lipid nanodisc [7092 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Sorum B, Mali SS, Hoel CM, Sridharan S, Remis JP, Toso DB, Kotecha A, Bautista DM, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
4.8 TB | 6.5 Å | |
| 2019-02-19 | The 1.54 Å structure of Apoferritin by CRYOARM300 with cold-FEG [972 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato T, Makino F, Nakane T, Terahara N, Kaneko T, Shimizu Y, Motoki S, Ishikawa I, Yonekura K, Namba K [DOI: 10.1017/S1431927619005725] |
145.9 GB | 1.54 Å | |
| 2025-03-31 | The Anti-Mullerian Hormone prodomain in complex with the growth factor and 6E11 fab [multiple data sets in TIFF and MRC formats] | Howard JA, Thompson TB [Pubmed: 39805014] [DOI: 10.1073/pnas.2418088122] |
4.1 TB | 3.2 - 3.39 Å | |
| 2024-06-03 | The Cryo-EM 3D image reconstruction of isolated Lethocerus indicus Z-discs [3 tilt series in MRC format] | Yeganeh FA, Summerill C, Hu Z, Rahmani H, Taylor DW, Taylor KA [Pubmed: 37661214] [DOI: 10.1007/s10974-023-09657-1] |
23.0 GB | — | |
| 2026-06-17 | The Cryo-EM structure of human tRNA methyltransferase FTSJ1-THADA [14544 multi-frame micrographs composed of 48 frames each in TIFF format] | Ishiguro K, Fujimura A, Shirouzu M [Pubmed: 40483304] [DOI: 10.1038/s42003-025-08278-3] |
3.2 TB | 3.31 - 4.06 Å | |
| 2021-10-26 | The CryoEM Structure of Drosophila Flight Muscle Thick Filaments at 7Å Resolution [1510 multi-frame micrographs composed of 44 frames each in MRC format] | Daneshparvar N, Taylor DW, O'Leary TS, Rahmani H, Abbasiyeganeh F, Previs MJ, Taylor KA [Pubmed: 32718994] [DOI: 10.1101/2020.06.05.136580] |
8.7 TB | 7.0 - 8.0 Å | |
| 2025-07-18 | The CryoEM structure of N49-P9.6-FR3 and PGT121 Fabs in complex with BG505 SOSIP.664 [multiple data sets in TIFF format] | Nguyen DN, Tolbert WD, Pazgier M [Pubmed: 40373766] [DOI: 10.1016/j.str.2025.04.016] |
702.0 GB | 4.02 Å | |
| 2023-08-20 | The J-K RNA fragment of encephalomyocarditis virus IRES in complex with eIF4G-HEAT1 and eIF4A [6194 multi-frame micrographs composed of 40 frames each in TIFF format] | Suzuki H, Fujiyoshi Y [Pubmed: 37640715] [DOI: 10.1038/s41467-023-40582-6] |
1018.5 GB | 3.76 Å | |
| 2021-07-29 | The Myosin II Coiled Coil Domain Atomic Structure in its Native Environment [multiple data sets in MRC and MRCS formats] | Rahmani H, Hu Z, Daneshparvar N, Taylor DW, Taylor KT [Pubmed: 33782130] [DOI: 10.1073/pnas.2024151118] |
13.3 TB | 4.25 Å | |
| 2024-01-05 | The Noc1-Noc2 RNP - a co-transcriptional large ribosomal assembly intermediate [multiple data sets in TIFF format] | Sanghai ZA, Piwowarczyk R, Vanden Broeck A, Klinge S [Pubmed: 37037974] [DOI: 10.1038/s41594-023-00947-3] |
5.7 TB | 4.0 Å | |
| 2024-08-29 | The Prothrombin-Prothrombinase Interaction [2390 micrographs in MRC format] | Stojanovski BM, Mohammed BM, Ruben EA, Summers B, Rau MJ, Fitzpatrick JAJ, Di Cera E [Pubmed: 35427420] [DOI: 10.1182/blood.2022015807] |
149.4 GB | 5.3 - 6.47 Å | |
| 2017-06-01 | The Structure of the Yeast Mitochondrial Ribosome [stack of 2524 particles in MRCS format] | Desai N, Brown A, Amunts A, Ramakrishnan V [Pubmed: 28154081] [DOI: 10.1126/science.aal2415] |
138.6 GB | 3.2 - 4.97 Å | |
| 2025-07-23 | The barley MLA13-AVRA13 heterodimer [multiple data sets in MRC format] | Lawson AW, Flores-Ibarra A, Gunkel M, Behrmann E, Schulze-Lefert P [Pubmed: 39948409] [DOI: 10.1038/s44318-025-00373-9] |
4.7 TB | 3.8 Å | |
| 2022-05-24 | The complex of dephosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) and Lumacaftor (VX-809) [3191 multi-frame micrographs composed of 50 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
1.4 TB | 3.9 Å | |
| 2022-06-17 | The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Lumacaftor (VX-809) [7650 multi-frame micrographs composed of 60 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
5.8 TB | 2.7 Å | |
| 2022-05-24 | The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Tezacaftor (VX-661) [4257 multi-frame micrographs composed of 50 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
1.8 TB | 3.8 Å | |
| 2023-08-20 | The conformational cycle of prestin underlies outer-hair cell electromotility [6796 multi-frame micrographs composed of 40 frames each in TIFF format] | Perozo E [Pubmed: 34695838] [DOI: 10.1038/s41586-021-04152-4] |
3.1 TB | 3.3 Å |