Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-02-24 | Volume electron microscopy reveals heterogeneity of the hemostatic response in veins and arteries [multiple data sets in TIFF format] | Tomaiuolo T, Christensen TA, Stalker TJ | 169.2 GB | — | |
| 2026-01-26 | CryoEM structure of cyclised H-pilus mutant (D69N) [600 multi-frame micrographs composed of 43 frames each in MRC format] | Ishimoto N, Beis K | 806.3 GB | 2.88 Å | |
| 2026-01-26 | CryoEM structure of cyclised H-pilus mutant (D69A) [711 multi-frame micrographs composed of 46 frames each in TIFF format] | Ishimoto N, Beis K | 155.7 GB | 3.15 Å | |
| 2026-01-26 | CryoEM structure of cyclised H-pilus mutant (D69G) [200 multi-frame micrographs composed of 50 frames each in MRC format] | Ishimoto N, Beis K | 312.5 GB | 3.11 Å | |
| 2026-01-26 | CryoEM structure of cyclised H-pilus mutant (D69R) [600 multi-frame micrographs composed of 50 frames each in MRC format] | Ishimoto N, Beis K | 937.6 GB | 2.89 Å | |
| 2026-01-26 | SARS-COV-2-6P-MUT7 S PROTEIN-DY-III-281 [multiple data sets in TIFF format] | Niu L, Chandravanshi M, Tolbert WD, Pazgier M [Pubmed: 41081594] [DOI: 10.1128/jvi.01034-25] |
3.6 TB | 3.3 - 3.56 Å | |
| 2026-06-26 | Echovirus 18 genome release in situ [41 tilt series in MRC format] | Mukhamedova LN, Plevka P, Trebichalska Z, Novacek J, Buchta D, Levdansky Y, Moravcova J, Hrebik D, Fuzik T, Tollefsrud TG, Andersen TJ | 3.8 GB | — | |
| 2026-01-22 | Single Particle Raw Images for nicotinic receptor alpha 7 in complex with alpha-bungarotoxin [3244 multi-frame micrographs composed of 40 frames each in TIFF format] | Noviello CM, Hibbs RE [Pubmed: 33735609] [DOI: 10.1016/j.cell.2021.02.049] |
2.1 TB | 3.0 Å | |
| 2026-03-05 | Structure of the human RalGAP2 complex [multiple data sets in EER and MRC formats] | Rasche R, Klink BU, Chen M, Gatsogiannis C, Kümmel D [Pubmed: 40738882] [DOI: 10.1038/s41467-025-61743-9] |
52.0 TB | 3.79 - 4.35 Å | |
| 2026-03-16 | CRYO ARM 200 II mouse heavy chain apoferritin at 1.24 A [13654 multi-frame micrographs composed of 81 frames each in TIFF format] | Danev R, Yanagisawa H, Yamashita K, Eisenstein F, Kikkawa M [Pubmed: 42268577] [DOI: 10.64898/2026.01.09.698548] |
1.6 TB | 1.24 Å | |
| 2026-03-09 | 100 kV apoferritin at 1.91 A with DECTRIS SINGLA detector on CRYO ARM 200 II [17424 multi-frame micrographs composed of 13500 frames each in BIG DATA VIEWER HDF5 format] | Danev R, Yanagisawa H, Yamashita K, Eisenstein F, Kikkawa M [DOI: 10.64898/2026.01.09.698548] |
8.0 TB | 1.91 Å | |
| 2026-01-19 | Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB [2873 multi-frame micrographs composed of 40 frames each in TIFF format] | De Bei O, Chirgadze DY, Hardwick SW, Luisi BF, Campanini B [Pubmed: 35357971] [DOI: 10.1073/pnas.2116708119] |
617.5 GB | 2.89 - 3.62 Å | |
| 2026-06-02 | Motioncorrected micrographs of Chloroplast Glutamyl Peptidase D855N [4206 micrographs in MRC format] | Ehrlich J.J., Routray P., van Wijk K. J., Kawate T. [Pubmed: 42144868] [DOI: 10.1002/pro.70624] |
2.1 TB | 3.0 Å | |
| 2026-06-02 | Motioncorrected micrographs of Chloroplast Glutamyl Peptidase S781R [1826 micrographs in MRC format] | Ehrlich J.J., Routray P., van Wijk K. J., Kawate T. [Pubmed: 42144868] [DOI: 10.1002/pro.70624] |
641.3 GB | 3.2 Å | |
| 2026-06-01 | Motioncorrected micrographs of Chloroplast Glutamyl Peptidase [2046 micrographs in MRC format] | Ehrlich J.J., Routray P., van Wijk K. J., Kawate T. [Pubmed: 42144868] [DOI: 10.1002/pro.70624] |
1.0 TB | 3.0 - 3.3 Å | |
| 2026-01-21 | Particle stack of molecular determinants for the association of human hormone-sensitive lipase with lipid droplets [stack of 154462 particles in MRCS format] | Liao J, Peng H, Xu Q, Wu J, Hu Q [Pubmed: 40221426] [DOI: 10.1038/s41467-025-58887-z] |
98.5 GB | 3.4 Å | |
| 2026-02-03 | Cryo-EM structure of the Chromera velia PSI supercomplex at 1.84 Angstrom resolution [multiple data sets in EER format] | Yuan X, Lukeš M, Qian P, Charras Q, Smrčka T, Man P, Kovářová L, Koník P, Heilmann E, Al-Amoudi A, Sobotka R, Naschberger A [Pubmed: 41423677] [DOI: 10.1038/s41467-025-67637-0] |
10.5 TB | 1.84 - 2.05 Å | |
| 2026-02-10 | In situ structure of bacterial 50S ribosomes [28790 multi-frame micrographs composed of 980 frames each in EER format] | Al‐Amoudi A, Baradaran R, Yuan X, Wú F, Naschberger A [Pubmed: 41476251] [DOI: 10.1038/s42003-025-09441-6] |
9.1 TB | 2.3 - 3.25 Å | |
| 2026-01-30 | Single Particle Raw Images for nicotinic receptor alpha 7 in complex with epibatidine [26952 multi-frame micrographs composed of 50 frames each in TIFF format] | Noviello CM, Hibbs RE [Pubmed: 33735609] [DOI: 10.1016/j.cell.2021.02.049] |
7.1 TB | 3.6 Å | |
| 2026-01-26 | Structure of a headful DNA-packaging bacterial virus at 2.89 Angstrom resolution by electron cryo-microscopy [multiple data sets in MRC format] | Zhao H, Li K, Jiang W, Tang L [Pubmed: 28320961] [DOI: 10.1073/pnas.1615025114] |
1.1 TB | 2.89 Å | |
| 2026-01-29 | Cryo electron microscopy of modified human GABA(A) receptors reconstituted in lipid nanodiscs with the ligand GABOB [multiple data sets in MRCS format] | Fan C, Cowgill J, Howard RJ, Lindahl E [Pubmed: 40750757] [DOI: 10.1038/s41467-025-61932-6] |
168.5 GB | 2.14 - 2.41 Å | |
| 2026-02-16 | Structural basis for loading of Transcription Repair-Coupling factor Mfd onto stalled elongation complexes [7811 multi-frame micrographs composed of 50 frames each in TIFF format] | Brewer J, Campbell EA, Darst SA [Pubmed: 40949946] [DOI: 10.1101/2025.09.05.674597] |
1.8 TB | 3.48 - 4.29 Å | |
| 2026-02-03 | Single Particle Raw Images for nicotinic receptor alpha 7 in complex with epibatidine and PNU [multiple data sets in TIFF format] | Noviello CM, Hibbs RE [Pubmed: 33735609] [DOI: 10.1016/j.cell.2021.02.049] |
7.2 TB | 2.7 Å | |
| 2026-02-13 | Unaligned Movies of E. coli grown at 37°C clarified cell lysate [9748 multi-frame micrographs composed of 45 frames each in TIFF format] | May MB [Pubmed: 40894545] [DOI: 10.1101/2025.08.21.669550] |
2.4 TB | — | |
| 2026-02-11 | Unaligned Movies of E. coli grown at 25°C clarified cell lysate [7908 multi-frame micrographs composed of 45 frames each in TIFF format] | May MB, Lopez Perez GS, Davis JH [Pubmed: 40894545] [DOI: 10.1101/2025.08.21.669550] |
2.0 TB | — |