Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-09-05 |  |
Benchmark SBF SEM data of HeLa cells previously imaged by Zeiss LSM900 Airyscan microscopy [multiple data sets in DM4 and TIFF formats] | Domart MC, Collinson LM [DOI: 10.1101/2023.05.11.540445] |
39.2 GB | — |
| 2025-09-05 |  |
Benchmark TEM data of mouse brain previously imaged by Nikon confocal microscopy [1 micrographs in TIFF format] | Konishi KK, Neves GN, Russell MR, Burrone JB, Fleck RF [DOI: 10.1111/jmi.13436] |
2.5 GB | — |
| 2025-08-29 |  |
Benchmarking Talos Arctica with K3 and Biocontinuum energy filter [1483 multi-frame micrographs composed of 50 frames each in TIFF format] | Maruthi K, Morais M | 334.9 GB | 1.88 Å |
| 2018-06-13 |  |
Benchmarking cryo-EM single particle analysis workflow [1614 multi-frame micrographs composed of 30 frames each in MRC format] | Kim LY, Rice WJ, Eng ET, Kopylov M, Cheng A, Raczkowski AM, Jordan KD, Bobe D, Potter CS, Carragher B [Pubmed: 29951483] [DOI: 10.3389/fmolb.2018.00050] |
85.6 GB | 2.4 - 2.8 Å |
| 2018-05-11 |  |
Benchmarking cryo-EM single particle analysis workflow [1626 multi-frame micrographs composed of 30 frames each in MRC format] | Kim LK, Rice WJ, Eng ET, Kopylov M, Cheng A, Raczkowski AM, Jordan KJ, Bobe D, Potter CS, Carragher B [Pubmed: 29951483] [DOI: 10.3389/fmolb.2018.00050] |
345.0 GB | 3.0 - 4.6 Å |
| 2018-05-04 |  |
Benchmarking cryo-EM single particle analysis workflow [699 multi-frame micrographs composed of 33 frames each in MRC format] | Kim LK, Rice WJ, Eng ET, Kopylov M, Cheng A, Raczkowski AR, Jordan KD, Bobe D, Potter CS, Carragher B [Pubmed: 29951483] [DOI: 10.3389/fmolb.2018.00050] |
37.3 GB | 2.5 - 2.8 Å |
| 2018-12-13 |  |
Beta-2-microglobulin fibrils with multiple polymorphs formed at pH 2 [5549 micrographs in MRC format] | Iadanza MG [Pubmed: 30375379] [DOI: 10.1038/s41467-018-06761-6] |
294.3 GB | 3.975 Å |
| 2014-11-19 |  |
Beta-galactosidase Falcon-II micrographs plus manually selected coordinates by Richard Henderson [84 micrographs in MRC format] | Scheres SH [Pubmed: 25486611] [DOI: 10.1016/j.jsb.2014.11.010] |
5.3 GB | 4.2 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with L-ribose [517 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
669.1 GB | 2.3 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with PETG [562 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
720.1 GB | 2.2 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with deoxygalacto-nojirimycin [598 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
765.8 GB | 2.3 Å |
| 2023-02-28 |  |
Beta-galactosidase on EG-grid [3500 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
369.6 GB | 1.81 Å |
| 2026-03-30 |  |
Borna disease virus 1 nucleoprotein complexes [multiple data sets in TIFF format] | Sugita Y, Hirai Y, Goto SH, Horie M | 8.0 TB | 2.78 - 9.12 Å |
| 2020-04-03 |  |
BurrH bound to DNA Origami Goniometer [multiple data sets in MRC and MRCS formats] | Aksel T, Yu Z, Cheng Y, Douglas SM [Pubmed: 33077960] [DOI: 10.1038/s41587-020-0716-8] |
1.3 TB | 6.5 Å |
| 2023-01-03 |  |
C-terminal half of LRRK2 (I2020T) bound to microtubule in presence of MLi-2 kinase inhibitor [2354 multi-frame micrographs composed of 55 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
684.8 GB | 4.5 - 18.0 Å |
| 2023-01-03 |  |
C-terminal half of Leucine Rich Repeat Kinase 1 (LRRK1) [3629 multi-frame micrographs composed of 50 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
1.2 TB | 5.8 Å |
| 2026-03-27 |  |
C. thermocellum UvrA (K39A) in complex with DNA with a fluorescein modification and AMPPNP [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
1.1 TB | 3.63 Å |
| 2026-03-27 |  |
C. thermocellum UvrA (K647A) in complex with DNA with a fluorescein modification [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
2.1 TB | 4.81 Å |
| 2026-03-27 |  |
C. thermocellum UvrA [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
666.2 GB | 2.97 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with AMPPNP [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
764.0 GB | 2.96 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with DNA with a fluorescein modification [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
1.2 TB | 3.14 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with DNA with a fluorescein modification and ADP [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
1.4 TB | 3.87 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with DNA with a fluorescein modification and AMPPNP [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
2.2 TB | 3.1 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with DNA with an abasic site [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
3.1 TB | 3.84 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with DNA with an abasic site and AMPPNP [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
2.7 TB | 2.74 - 3.04 Å |
