Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-07 | Transporter associated with antigen processing (TAP) bound to ATP, ADP, and the viral protein rhUS6 from rhesus cytomegalovirus [18184 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.7 TB | 3.3 Å | |
| 2024-07-18 | Transporter associated with antigen processing (TAP) bound to the 14-mer peptide LPAVVGLSPGEQEY [16272 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [DOI: 10.1101/2023.06.16.545308] |
5.5 TB | 3.9 Å | |
| 2025-06-07 | Transporter associated with antigen processing (TAP) bound to the 7-mer peptide RRYSTEL [17171 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [Pubmed: 38805290] [DOI: 10.1073/pnas.2320879121] |
5.5 TB | 5.1 Å | |
| 2024-07-14 | Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL [16306 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [Pubmed: 38805290] [DOI: 10.1073/pnas.2320879121] |
5.6 TB | 3.8 Å | |
| 2025-02-03 | Transporter associated with antigen processing (TAP) bound to the 9-mer peptide ILKEPVHGV [34508 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [Pubmed: 38805290] [DOI: 10.1073/pnas.2320879121] |
11.3 TB | 3.5 Å | |
| 2025-04-15 | Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL [26318 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [Pubmed: 38805290] [DOI: 10.1073/pnas.2320879121] |
8.8 TB | 3.5 Å | |
| 2024-07-19 | Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL [7933 multi-frame micrographs composed of 50 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [DOI: 10.1101/2023.06.16.545308] |
4.3 TB | 3.5 Å | |
| 2025-12-07 | Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL and ATP [4266 multi-frame micrographs composed of 40 frames each in TIFF format] | Lee J, Manon V, Chen J | 3.3 TB | 3.6 Å | |
| 2025-12-07 | Transporter associated with antigen processing (TAP) bound to the viral protein BNLF2a from Epstein-Barr virus [8676 multi-frame micrographs composed of 40 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.5 TB | 3.8 Å | |
| 2024-07-07 | Transporter associated with antigen processing (TAP) in the apo state [21556 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [Pubmed: 38805290] [DOI: 10.1073/pnas.2320879121] |
7.1 TB | 3.6 Å | |
| 2015-10-01 | Tubulin Chaperone complexes TBC-DEG Q73L: alpha beta-tubulin complex [stack of 18361 particles in MRC format] | Nithianantham S, Le S, Seto E, Jia W, Leary J, Corbett KD, Moore JK, Al-Bassam J [Pubmed: 26208336] [DOI: 10.7554/eLife.08811] |
1.1 GB | 24.0 Å | |
| 2015-10-01 | Tubulin Chaperone complexes TBC-DEG Q73L: alpha beta-tubulin:TBCC complex [stack of 16801 particles in MRC format] | Nithianantham S, Le S, Seto E, Jia W, Leary J, Corbett KD, Moore JK, Al-Bassam J [Pubmed: 26208336] [DOI: 10.7554/eLife.08811] |
1.0 GB | 24.0 Å | |
| 2025-07-30 | Turnip Crinkle Virus: virions (TCV-M) [multiple data sets in TIFF format] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 273.2 GB | 3.43 Å | |
| 2025-07-30 | Turnip Crinkle Virus: virus-like particles (TCV-P38) [multiple data sets in MRC and TIFF formats] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 2.8 TB | 3.47 Å | |
| 2025-07-25 | Turnip Crinkle Virus: virus-like particles (TCV-P38+1) [multiple data sets in TIFF format] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 918.5 GB | 3.13 Å | |
| 2025-04-24 | Turnover condition dataset for Bacillus subtilis class Ib ribonucleotide reductase [4537 multi-frame micrographs composed of 50 frames each in TIFF format] | Xu D, Thomas WC, Burnim AA, Ando N [Pubmed: 40075098] [DOI: 10.1038/s41467-025-57735-4] |
1.4 TB | 2.53 - 4.64 Å | |
| 2022-02-24 | Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 1 [331 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
476.1 GB | 2.07 Å | |
| 2022-03-08 | Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 2 [4000 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
1.5 TB | 1.92 Å | |
| 2022-02-22 | Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 3 [1259 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
839.8 GB | 3.13 - 3.23 Å | |
| 2020-03-04 | Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy [1713 micrographs in MRC format] | Guerrero-Ferreira R, Taylor NM, Arteni AA, Kumari P, Mona D, Ringler P, Britschgi M, Lauer ME, Makky A, Verasdonck J, Riek R, Melki R, Meier BH, Böckmann A, Bousset L, Stahlberg H [Pubmed: 31815671] [DOI: 10.7554/eLife.48907] |
90.9 GB | 2.98 - 3.4 Å | |
| 2025-01-21 | Type six secretion system exported effector 5 (Tse5) [10244 multi-frame micrographs composed of 50 frames each in EER format] | Gonzalez-Magana A, Tascon I, Altuna-Alvarez J, Velazquez C, Zabala M, Ubarretxena-Belandia I, Albesa-Jove D [Pubmed: 38016939] [DOI: 10.1038/s41467-023-43585-5] |
11.3 TB | 2.45 Å | |
| 2025-11-30 | Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex A [3636 multi-frame micrographs composed of 1512 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.8 TB | 2.97 Å | |
| 2025-11-18 | Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex B [3274 multi-frame micrographs composed of 1519 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.6 TB | 3.23 Å | |
| 2025-11-18 | Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex C [4473 multi-frame micrographs composed of 2639 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
4.3 TB | 3.31 Å | |
| 2024-07-12 | UFM1 ribosome E3 ligase complex bound to the 60S ribosomal subunit [multiple data sets in EER and MRC formats] | Makhlouf L [Pubmed: 38383789] [DOI: 10.1038/s41586-024-07093-w] |
22.6 TB | 2.2 - 3.2 Å |