Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-11-21 |  |
Micrographs of Rigid-Rod Aromatics BP-NBD [5610 multi-frame micrographs composed of 40 frames each in TIFF format] | Yi M, Wang F, Tan W, Hsieh JT, Egelman EH, Xu B [Pubmed: 35849554] [DOI: 10.1021/jacs.2c05491] |
1.2 TB | 2.4 Å |
| 2022-11-18 |  |
Micrographs of Rigid-Rod Aromatics pBP-NBD [8261 multi-frame micrographs composed of 40 frames each in TIFF format] | Yi M, Wang F, Tan W, Hsieh JT, Egelman EH, Xu B [Pubmed: 35849554] [DOI: 10.1021/jacs.2c05491] |
1.7 TB | 2.4 Å |
| 2022-05-17 |  |
Conformational rearrangements upon start codon recognition in human 48S translation initiation complex [multiple data sets in MRC and MRCS formats] | Yi SH, Petrychenko V, Schliep JE, Goyal A, Linden A, Chari A, Urlaub H, Stark H, Rodnina MV, Adio S, Fischer N [Pubmed: 35489072] [DOI: 10.1093/nar/gkac283] |
1.1 TB | 3.7 - 4.7 Å |
| 2024-06-27 |  |
Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 1 [15430 multi-frame micrographs composed of 45 frames each in TIFF format] | Yin Z [Pubmed: 38335062] [DOI: 10.1111/febs.17082] |
3.7 TB | 3.07 Å |
| 2024-07-03 |  |
Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 2 to 4 and initiation [7014 multi-frame micrographs composed of 45 frames each in TIFF format] | Yin Z [Pubmed: 38335062] [DOI: 10.1111/febs.17082] |
1.7 TB | 3.97 - 6.0 Å |
| 2024-07-03 |  |
Cryo-EM structure of human DNA polymerase alpha-primase at initiation [10677 multi-frame micrographs composed of 40 frames each in TIFF format] | Yin Z [Pubmed: 38335062] [DOI: 10.1111/febs.17082] |
2.4 TB | 4.03 Å |
| 2024-06-27 |  |
Cryo-EM structure of human DNA polymerase alpha-primase at handover [13261 multi-frame micrographs composed of 45 frames each in TIFF format] | Yin Z [Pubmed: 38335062] [DOI: 10.1111/febs.17082] |
3.3 TB | 6.15 Å |
| 2024-02-01 |  |
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus kidney [3373 multi-frame micrographs composed of 59 frames each in MRC format] | Yin Z, Agip ANA, Bridges HR, Hirst J [Pubmed: 38177503] [DOI: 10.1038/s44318-023-00001-4] |
3.8 TB | 6.2 Å |
| 2024-01-15 |  |
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart [7310 multi-frame micrographs composed of 25 frames each in TIFF format] | Yin Z, Agip ANA, Bridges HR, Hirst J [Pubmed: 38177503] [DOI: 10.1038/s44318-023-00001-4] |
3.2 TB | 3.2 - 4.3 Å |
| 2021-02-17 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I with ND6 P25L mutation [1492 multi-frame micrographs composed of 40 frames each in MRC format] | Yin Z, Bridges HR, Grba D, Hirst J [Pubmed: 33514727] [DOI: 10.1038/s41467-021-20942-w] |
3.1 TB | 3.82 Å |
| 2021-02-12 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I in the deactive state [1768 multi-frame micrographs composed of 30 frames each in MRCS format] | Yin Z, Bridges HR, Grba D, Hirst J, Blaza JN, Agip ANA [Pubmed: 29915388] [DOI: 10.1038/s41594-018-0073-1] |
2.7 TB | 3.17 - 3.9 Å |
| 2021-02-12 |  |
Atomic resolution structure of apoferritin from Titan Mono/BCorr microscope [43292 multi-frame micrographs composed of 40 frames each in MRC format] | Yip KM, Fischer N, Paknia E, Chari A, Stark H [Pubmed: 33087927] [DOI: 10.1038/s41586-020-2833-4] |
18.7 TB | 1.15 - 1.56 Å |
| 2020-02-24 |  |
Electron energy-filtered diffraction (eEFD) of catalase 3D crystal with CRYO ARM 300 [84 micrographs in MRC format] | Yonekura K, Ishikawa T, Maki-Yonekura S [Pubmed: 30928615] [DOI: 10.1016/j.jsb.2019.03.009] |
5.3 GB | — |
| 2022-11-28 |  |
Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1 [7650 multi-frame micrographs composed of 40 frames each in TIFF format] | Yoshikawa T, Makino F, Miyata T, Suzuki Y, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O [Pubmed: 35535582] [DOI: 10.1039/d2cc01541b] |
1.4 TB | 2.19 Å |
| 2020-12-04 |  |
Adeno-Associated Virus (AAV-DJ)-Cryo-EM Structure at 1.56 Å Resolution [2241 multi-frame micrographs composed of 200 frames each in TIFF format] | Yoshioka C [Pubmed: 33092282] [DOI: 10.3390/v12101194] |
2.8 TB | 1.56 Å |
| 2025-02-04 |  |
Single particle cryoEM data of Human OGG1 bound to a 35-bp DNA with an 8-oxoG in the middle [11615 multi-frame micrographs composed of 75 frames each in TIFF format] | You Q, Feng X, Cai Y, Baylin SB, Li H [Pubmed: 39341999] [DOI: 10.1038/s42003-024-06919-7] |
6.6 TB | 3.7 Å |
| 2025-02-04 |  |
Single particle cryoEM data of Nucleosome core particle containing an 8-oxoG damage site [5135 multi-frame micrographs composed of 50 frames each in TIFF format] | You Q, Feng X, Cai Y, Baylin SB, Li H [Pubmed: 39341999] [DOI: 10.1038/s42003-024-06919-7] |
1.8 TB | 3.3 Å |
| 2025-07-25 |  |
Single particle cryoEM data of Human OGG1 bound at the nucleosomal DNA entry site [17116 multi-frame micrographs composed of 75 frames each in TIFF format] | You Q, Feng X, Cai Y, Baylin SB, Li H [Pubmed: 39341999] [DOI: 10.1038/s42003-024-06919-7] |
8.9 TB | 3.2 Å |
| 2020-11-18 |  |
SARS-CoV-2 infection in human adult lung alveolar stem cells [multiple data sets in TIFF format] | Youk J, Kim T, Evans KV, Jeong YI, Hur Y, Hong SP, Kim JH, Yi K, Kim SY, Na KJ, Bleazard T, Kim HM, Fellows M, Mahbubani KT, Saeb-Parsy K, Kim SY, Kim YT, Koh GY, Choi BS, Ju YS, Lee JH [Pubmed: 33142113] [DOI: 10.1016/j.stem.2020.10.004] |
20.8 GB | — |
| 2025-11-14 |  |
Cryo-tomography of 1.4 nm-HAN-488 labeled ribosomes inside cells (ExoSloNano) [49 tilt series in TIFF format] | Young LN, Sherard A, Bennett E, Rosen MK, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Flaherty WA | 28.1 GB | — |
| 2025-11-14 |  |
Cryo-tomography of purified1.4 nm-HAN-488 labeled ribosomes from intact cells for validation of labeling method (ExoSloNano) [37 tilt series in TIFF format] | Young LN, Sherard A, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Flaherty WA, Bennett E, Rosen MK | 168.9 GB | — |
| 2025-11-14 |  |
Cryo-tomography of 1.4 nm-HAN-594 labeled nucleosomes inside cells (ExoSloNano) [41 tilt series in TIFF format] | Young LN, Sherard A, Narasimhan M, Flaherty WA, Bennett E, Rosen MK, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M | 6.5 GB | — |
| 2025-11-14 |  |
Cryo-tomography of 5 nm Nanogold labeled ribosomes from intact cells (ExoSloNano) [37 tilt series in TIFF format] | Young LN, Sherard A, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Riggi M, Flaherty WA, Rosen MK, Giraldez AJ, Villa E [DOI: 10.1101/2024.10.12.617288] |
41.6 GB | — |
| 2023-07-06 |  |
CryoEM micrographs of slipper limpet (Crepidula fornicata) hemocyanin [856 multi-frame micrographs composed of 30 frames each in MRC format] | Young MT, Pasqualetto G, Clare D [Pubmed: 37347755] [DOI: 10.1371/journal.pone.0287294] |
802.5 GB | 4.7 - 7.0 Å |
| 2025-01-09 |  |
Unaligned multi-frame micrographs of the mu opioid receptor bound to a nanobody antagonist NbE [5939 multi-frame micrographs composed of 44 frames each in MRC format] | Yu J, Kumar A, Zhang X, Martin C, Holsbeeck KV, Raia P, Koehl A, Laeremans T, Steyaert J, Manglik A, Ballet S, Boland A, Stoeber M [Pubmed: 38106026] [DOI: 10.1101/2023.12.06.570395] |
8.0 TB | 3.2 Å |
