Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-04-07 | Cryo-EM of connexin-46/50 in DMPC nanodiscs at neutral pH (Collection #3) [3261 multi-frame micrographs composed of 45 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
1.3 TB | 2.0 - 2.7 Å | |
| 2026-04-07 | Cryo-EM of connexin-46/50 in DMPC nanodiscs at low pH (Collection #4) [6057 multi-frame micrographs composed of 45 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
2.3 TB | 2.0 - 2.7 Å | |
| 2026-03-23 | Single particle cryo-EM dataset of the light-driven sodium pump ErNaR in the O2 state prepared by jet vitrification [28574 multi-frame micrographs composed of 50 frames each in EER format] | Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ [Pubmed: 41332690] [DOI: 10.1101/2025.11.21.689681] |
7.2 TB | 3.3 Å | |
| 2026-03-24 | Single particle cryo-EM dataset of the light-driven sodium pump ErNaR in the K2 state prepared by jet vitrification [30180 multi-frame micrographs composed of 50 frames each in EER format] | Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ [Pubmed: 41332690] [DOI: 10.1101/2025.11.21.689681] |
8.6 TB | 2.8 Å | |
| 2026-03-24 | Single particle cryo-EM dataset of the light-driven sodium pump ErNaR prepared by jet vitrification [13007 multi-frame micrographs composed of 50 frames each in EER format] | Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ [Pubmed: 41332690] [DOI: 10.1101/2025.11.21.689681] |
3.7 TB | 2.1 Å | |
| 2026-03-22 | Single particle cryo-EM dataset of mouse heavy chain apoferritin prepared by jet vitrification [6560 multi-frame micrographs composed of 50 frames each in EER format] | Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ [Pubmed: 41332690] [DOI: 10.1101/2025.11.21.689681] |
653.8 GB | 1.25 Å | |
| 2026-04-07 | Cryo-EM of connexin-46/50 in DMPC nanodiscs at low pH (Collection #5) [12423 multi-frame micrographs composed of 50 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
4.3 TB | 2.4 Å | |
| 2025-12-15 | Cryo-EM movies of RNA bound human PNPase in loading state [20390 multi-frame micrographs composed of 59 frames each in TIFF format] | Unseld O, Das H [DOI: 10.1093/nar/gkaf1296] |
5.3 TB | 2.08 - 2.65 Å | |
| 2025-12-16 | Cryo-EM movies of RNA bound human PNPase in pre-catalytic and loading state [4465 multi-frame micrographs composed of 50 frames each in TIFF format] | Unseld O, Das H [DOI: 10.1093/nar/gkaf1296] |
1.7 TB | 2.15 - 2.46 Å | |
| 2026-01-26 | Cryo-EM movies of Pi-bound human PNPase [6182 multi-frame micrographs composed of 46 frames each in TIFF format] | Unseld O, Das H [Pubmed: 41361968] [DOI: 10.1093/nar/gkaf1296] |
1.9 TB | 2.36 - 2.44 Å | |
| 2026-04-07 | Cryo-EM of connexin-46/50 in DMPC nanodiscs at low pH (Collection #1) [7071 multi-frame micrographs composed of 55 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 31221961] [DOI: 10.1038/s41598-019-44978-7] |
2.8 TB | 2.2 - 13.08 Å | |
| 2026-04-07 | Cryo-EM of Connexin-46/50 in DMPC nanodiscs returned to neutral pH (Collection #6) [6140 multi-frame micrographs composed of 50 frames each in TIFF format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
2.2 TB | 2.0 - 2.7 Å | |
| 2026-03-20 | Single particle cryo-EM dataset of as-prepared Bos taurus mitochondrial complex I in MSP2N2 nanodiscs treated with NADH [13056 multi-frame micrographs composed of 40 frames each in TIFF format] | Chung I, Hirst J [Pubmed: 41786699] [DOI: 10.1038/s41467-026-70030-0] |
5.2 TB | 2.01 - 2.61 Å | |
| 2026-04-07 | Cryo-EM of connexin-46/50 in amphipol at low pH (Collection #2) [557 multi-frame micrographs composed of 50 frames each in MRC format] | Jarodsky JM, Myers JB, Reichow SL [Pubmed: 41526355] [DOI: 10.1038/s41467-026-68311-9] |
237.7 GB | 2.7 Å | |
| 2025-12-19 | Cryo-EM structure of the prostaglandin D2 receptor 1 (DP1) complex in inactive and active states [multiple data sets in MRC and TIFF formats] | Davoudinasab B, Raskovalov A, Lee W, Kim D, Kim H, Lam JH, Han GW, Katritch V, Cherezov V [Pubmed: 41062467] [DOI: 10.1038/s41467-025-64002-z] |
6.0 TB | 2.45 - 2.89 Å | |
| 2025-12-19 | Human Connexin 26 dodecamer at 90mmHg PCO2, pH7.4 [multiple data sets in TIFF, MRC and MRCS formats] | Brotherton DH, Savva CG, Ragan TJ, Dale N, Cameron AD [Pubmed: 35276081] [DOI: 10.1016/j.str.2022.02.010] |
5.4 TB | 1.9 Å | |
| 2025-12-08 | .zarr file of a tomographic scan of a mouse skull [1024 reconstructed volumes in BIG DATA VIEWER HDF5 format] | Haberthür D | 2.6 GB | — | |
| 2025-12-16 | FusA (Pectobacterium atrosepticum ferrodoxin receptor) in the presence of Ra-LPS [7594 multi-frame micrographs composed of 40 frames each in MRC format] | Machin JM, Ranson NA [DOI: 10.1016/j.yjsbx.2025.100141] |
1.1 TB | 2.4 Å | |
| 2025-12-19 | Leopard-EM: An extensible 2DTM package to accelerate in situ structural biology [multiple data sets in MRC and EER formats] | Giammar MD, Dickerson JL, Hall LN, Lucas BA | 482.7 GB | — | |
| 2026-03-17 | Focused Ion Beam - Scanning Electron Microscopy volume of the aboral pole of a Nematostella Vectensis polyp [2347 multi-frame micrographs composed of 1 frames each in TIFF format] | Basu SH, Ronchi PR, Ikmi AI [DOI: 10.1101/2025.05.26.656114] |
16.4 GB | — | |
| 2025-12-05 | CryoEM of mycobacterial open-gate proteasome complexed with engineered bacterial enhancer binding protein (bEBP) [multiple data sets in TIFF and MRC formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
479.4 GB | 4.6 Å | |
| 2025-12-06 | CryoEM of E. coli RNA polymerase Sigma N transcription initiation intermediates [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
10.5 TB | 2.6 - 3.1 Å | |
| 2025-11-18 | GLIC in MSP1E3D1 nanodisc at pH 7.5 (asolectin) [5188 multi-frame micrographs composed of 40 frames each in MRC format] | Bharambe N, Li Z, Seiferth D, Balakrishna AM, Biggin PC, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
1.5 TB | 3.42 Å | |
| 2025-12-03 | GLIC F116A mutant in MSP1E3D1 nanodisc at pH 2.5 [11131 multi-frame micrographs composed of 1575 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
7.3 TB | 2.14 Å | |
| 2025-12-03 | GLIC Y251A mutant in MSP1E3D1 nanodisc at pH 2.5 [10188 multi-frame micrographs composed of 1251 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
6.2 TB | 2.87 Å |