Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-03-16 |  |
Cryo-EM structure of the Danio rerio tRNA ligase complex [multiple data sets in TIFF and MRCS formats] | Chamera S, Zajko W, Czarnocki-Cieciura M, Jaciuk M, Koziej Ł, Nowak J, Wycisk K, Sroka M, Chramiec-Głąbik A, Śmietański M, Gołębiowski F, Warmiński M, Jemielity J, Glatt S, Nowotny M [Pubmed: 40220997] [DOI: 10.1016/j.jbc.2025.108506] |
3.7 TB | 3.33 Å |
| 2026-06-17 |  |
Single particle cryo-EM structure of the Neisseria meningitidis quinol-dependent nitric oxide reductase (NmqNOR) [multiple data sets in TIFF format] | Gopalasingam CC, Egami H, Shigematsu H, Sakaue M, Fukumoto K, Gerle C, Yamamoto M, Shiro Y, Muramoto K, Tosha T [Pubmed: 41896389] [DOI: 10.1038/s42003-026-09754-0] |
3.0 TB | 1.89 - 2.25 Å |
| 2026-04-09 |  |
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab [multiple data sets in TIFF and MRC formats] | Sedzro JC, Photenhauer AL, Ohi MD, Morrissey JH [Pubmed: 40811856] [DOI: 10.1182/blood.2025029430] |
1.8 TB | 3.2 - 3.7 Å |
| 2026-04-09 |  |
Nanodisc-embedded human TF/FVIIa/XK1 [multiple data sets in TIFF and MRC formats] | Sedzro JC, Photenhauer AL, Ohi MD, Morrissey JH [Pubmed: 40811856] [DOI: 10.1182/blood.2025029430] |
4.8 TB | 6.0 Å |
| 2026-05-27 |  |
Cryo-EM reconstruction of undecorated GDP microtubule (13-3) [5004 micrographs in MRC format] | Munoz-Hernandez, Hugo HMH, Filipcik, Pavel PF, Steinmetz, Michel O. MOS, Wieczorek, Michal MW [Pubmed: 42044018] [DOI: 10.1107/S2059798326003062] |
530.9 GB | 3.62 Å |
| 2026-03-30 |  |
Aligned, dose-weighted electron micrographs of His-tagged Exo84 and Sro7 on NI-NTA lipid monolayer grids [4970 micrographs in MRC format] | Brennwald P, Strauss JD, Baker RW [Pubmed: 41083086] [DOI: 10.1016/j.jsb.2025.108253] |
436.4 GB | 3.1 Å |
| 2026-03-17 |  |
Clostridium butyricum Argonaute wild type protein in apo form [7472 multi-frame micrographs composed of 60 frames each in EER format] | Barendse P, van Drimmelen M, Pacesa M, Sivaraman A, Zhang DK, Nickel L, Niault T, Lindhoud S, Roosjen M, Hegge JW, Park K, Correia BE, van der Oost J, Joo C, Westphal AH, Swarts DC | 3.1 TB | — |
| 2026-03-17 |  |
Clostridium butyricum Argonaute wild type protein in binary form (single stranded guide DNA bound) [18989 multi-frame micrographs composed of 60 frames each in EER format] | Barendse P, van Drimmelen M, Pacesa M, Sivaraman A, Zhang DK, Nickel L, Niault T, Lindhoud S, Roosjen M, Hegge JW, Park K, Correia BE, van der Oost J, Joo C, Westphal AH, Swarts DC | 4.1 TB | — |
| 2026-03-18 |  |
Clostridium butyricum Argonaute catalytic mutant in ternary form (bound to guide DNA and target DNA) and de novo designed Dimbd2 [12538 multi-frame micrographs composed of 50 frames each in EER format] | Barendse P, van Drimmelen M, Pacesa M, Sivaraman A, Zhang DK, Nickel L, Niault T, Lindhoud S, Roosjen M, Hegge JW, Park K, Correia BE, van der Oost J, Joo C, Westphal AH, Swarts DC | 4.0 TB | — |
| 2026-05-27 |  |
Cryo-EM reconstruction of KIF5A motor domain-decorated, GMPCPP microtubule [1676 micrographs in MRC format] | Munoz-Hernandez, Hugo HMH, Filipcik, Pavel PF, Wieczorek, Michal M [Pubmed: 42044018] [DOI: 10.1107/S2059798326003062] |
88.9 GB | 4.16 Å |
| 2026-04-13 |  |
Raw and motion corrected micrographs for Cryo-EM structure of rat TRPM1 in the apo state [multiple data sets in MRC format] | Fabrizio MF, Zhao CZ [Pubmed: 41857038] [DOI: 10.1038/s41467-026-70722-7] |
5.7 TB | 4.3 Å |
| 2026-03-19 |  |
Clostridium butyricum Argonaute wild type apo protein complexed with de novo designed binder2 [7097 multi-frame micrographs composed of 50 frames each in EER format] | Barendse P, van Drimmelen M, Pacesa M, Sivaraman A, Zhang DK, Nickel L, Niault T, Lindhoud S, Roosjen M, Hegge JW, Park K, Correia BE, van der Oost J, Joo C, Westphal AH, Swarts DC | 3.1 TB | — |
| 2026-03-20 |  |
Clostridium butyricum Argonaute catalytic mutant in ternary form (bound to guide DNA and target DNA) [14596 multi-frame micrographs composed of 50 frames each in EER format] | Barendse P, van Drimmelen M, Pacesa M, Sivaraman A, Zhang DK, Nickel L, Niault T, Lindhoud S, Roosjen M, Hegge JW, Park K, Correia BE, van der Oost J, Joo C, Westphal AH, Swarts DC | 4.7 TB | — |
| 2026-04-28 |  |
Structure of Mycobacterium tuberculosis pyruvate dehydrogenase complex E2p core subunit DlaT [17054 multi-frame micrographs composed of 75 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 41690596] [DOI: 10.1016/j.jbc.2026.111284] |
8.3 TB | 2.51 - 2.65 Å |
| 2026-06-17 |  |
R583A mutant of glycogen phosphorylase from Segatella copri [9508 multi-frame micrographs composed of 40 frames each in TIFF format] | Takai M, Fukuda Y [Pubmed: 41662519] [DOI: 10.1073/pnas.2518513123] |
1.6 TB | 3.0 Å |
| 2026-06-17 |  |
R583A mutant of glycogen phosphorylase from Segatella copri in the presence of AMP [8250 multi-frame micrographs composed of 40 frames each in TIFF format] | Takai M, Fukuda Y [Pubmed: 41662519] [DOI: 10.1073/pnas.2518513123] |
1.5 TB | 2.96 Å |
| 2026-05-29 |  |
Membrane insertion of mitochondrial-encoded proteins regulates ribosome decoding speed [multiple data sets in MRC and MRCS formats] | Schöndorf T, Petrychenko V, Kotan I, Dahal D, Napieraj N, Cruz-Zaragoza LD, Wang C, Urbach O, Gall T, Dennerlein S, Kramer G, Fischer N, Rehling P [Pubmed: 42098403] [DOI: 10.1038/s41594-026-01803-w] |
3.5 TB | — |
| 2026-06-23 |  |
Electron tomography reveals perturbed inter-organellar relationship in PbSFA mutants [multiple data sets in MRC format] | Ali I, Dorner L, Chowdhury MR, Sokolowski-Adams Y, Abadzhieva E, Reich A, Wittmaack M, Sattler JM, Frischknecht F, Dvorin JD | 27.2 GB | — |
| 2026-05-02 |  |
Cryo-EM micrographs of the clathrin adaptor complex AP-2 and the assembly chaperone CCDC32; dataset contains multiple assembly and conformational states [multiple data sets in TIFF format] | Sloan DE, Yanagisawa H, Kikkawa M, Baker RW [Pubmed: 40799577] [DOI: 10.1101/2025.08.05.668722] |
17.7 TB | 2.55 - 3.06 Å |
| 2026-04-08 |  |
Cryo-EM micrographs of phosphorylated AP2 bound to the endocytic regulator NECAP [multiple data sets in TIFF format] | Partlow EA, Baker RW, Leschziner AE, Hollopeter G [Pubmed: 31464684] [DOI: 10.7554/eLife.50003] |
2.6 TB | 3.2 - 3.5 Å |
| 2026-07-27 |  |
Cryo-ET dataset on lamellae of Dictyostelium discoideum cells acquired with various tilt-increments [multiple data sets in MRC format] | Tuijtel MW, Beck M [DOI: 10.7554/eLife.111639.1] |
707.5 GB | — |
| 2026-03-27 |  |
C. thermocellum UvrA [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
666.2 GB | 2.97 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with AMPPNP [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
764.0 GB | 2.96 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with unmodified DNA and AMPPNP [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
4.0 TB | 3.1 - 3.23 Å |
| 2026-03-27 |  |
C. thermocellum UvrA in complex with DNA with an abasic site [multiple data sets in TIFF and MRCS formats] | Nirwal S, Czarnocki-Cieciura M, Zajko W, Skowronek K, Szczepanowski RH, Nowotny M [Pubmed: 41381534] [DOI: 10.1038/s41467-025-67075-y] |
3.1 TB | 3.84 Å |
