Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-11-06 |  |
Comparative 3D ultrastructure of Plasmodium falciparum gametocytes [multiple data sets in TIFF format] | Evers F, Roverts R, Boshoven C, Lindert MK, Sinden RE, Akiva A, Kooij TWA, Verhoef JMJ, Sommerdijk N [DOI: 10.1101/2023.03.10.531920] |
239.1 GB | — |
| 2018-01-24 |  |
Tilt-series of e. coli carrying empty ple6 plasmid induced with 20 uM IPTG [4 tilt series in MRC format] | Swulius MT, Jensen GJ [Pubmed: 22904287] [DOI: 10.1128/JB.00505-12] |
3.8 GB | — |
| 2020-07-21 |  |
Human delta protocadherin 1 full ectodomains on membranes, tomogram 3 [multiple data sets in MRC and TIFF formats] | Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna R, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 32101743] [DOI: 10.1016/j.celrep.2020.02.003] |
106.5 GB | — |
| 2023-02-22 |  |
Electron cryo-tomography data of HeLa cells expressing untagged Cidec [multiple data sets in MRC format] | Ganeva I, Lim K, Boulanger J, Hoffmann PC, Muriel O, Borgeaud AC, Hagen WJH, Savage DB, Kukulski W [Pubmed: 36800289] [DOI: 10.1016/j.celrep.2023.112107] |
42.8 GB | — |
| 2024-09-26 |  |
SBF SEM images of a notoroid in transverse orientation (Fig S24) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
11.5 GB | — |
| 2018-01-24 |  |
Tilt-series of e. coli carrying the ple7 plasmid carrying YFP-MreB induced with 20 uM IPTG [7 tilt series in MRC format] | Swulius MT, Jensen GJ [Pubmed: 22904287] [DOI: 10.1128/JB.00505-12] |
6.6 GB | — |
| 2020-07-28 |  |
Human delta protocadherin 10 full ectodomains on membranes, tomogram 1 [multiple data sets in TIFF and MRC formats] | Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna R, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 32101743] [DOI: 10.1016/j.celrep.2020.02.003] |
599.5 GB | — |
| 2023-02-22 |  |
Electron cryo-tomography data of HeLa cells expressing Cidec-EGFP [multiple data sets in MRC format] | Ganeva I, Lim K, Boulanger J, Hoffmann PC, Muriel O, Borgeaud AC, Hagen WJH, Savage DB, Kukulski W [Pubmed: 36800289] [DOI: 10.1016/j.celrep.2023.112107] |
187.3 GB | — |
| 2024-09-26 |  |
SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 1) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
170.0 GB | — |
| 2025-07-08 |  |
FIB-SEM Mouse kidney tissue samples [377 reconstructed volumes in TIFF format] | Slamková D., Hurník Konečná T, Sviben S [Pubmed: 37279941] [DOI: 10.1093/molbev/msad134] |
9.1 GB | — |
| 2018-01-24 |  |
Tilt-series of e. coli carrying the ple7 plasmid carrying YFP-MreB hyper-overexpressed by induction with 1uM IPTG [5 tilt series in MRC format] | Swulius MT, Jensen GJ [Pubmed: 22904287] [DOI: 10.1128/JB.00505-12] |
5.0 GB | — |
| 2020-07-28 |  |
Human delta protocadherin 10 full ectodomains on membranes, tomogram 2 [1 tilt series in MRC format] | Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna R, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 32101743] [DOI: 10.1016/j.celrep.2020.02.003] |
104.6 GB | — |
| 2021-12-14 |  |
Identifying long-range synaptic inputs using genetically encoded labels and volume electron microscopy [6 multi-frame micrographs composed of 1 frames each in TIFF format] | Ayuso-Jimeno IP, Ronchi P, Wang T, Gallori CE, Gross CT [Pubmed: 35715545] [DOI: 10.1038/s41598-022-14309-4] |
68.7 GB | — |
| 2024-05-16 |  |
In situ cryo-electron tomography of Saccharomyces cerevisiae [37 multi-frame micrographs composed of 252 frames each in EER format] | Comet M, Dijkman PM, Boer Iwema R, Franke T, Masiulis S, Schampers R, Raschdorf O, Grollios F, Pryor Jr. EE, Drulyte I [Pubmed: 38512070] [DOI: 10.1107/S2059798324001840] |
3.1 GB | — |
| 2024-09-26 |  |
SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 2) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
232.5 GB | — |
| 2025-07-08 |  |
FIB-SEM Rat brain tissue samples [multiple data sets in TIFF and PNG formats] | Slamková D., Hurník Konečná T [Pubmed: 37279941] [DOI: 10.1093/molbev/msad134] |
829.8 MB | — |
| 2018-02-07 |  |
Raw 2d tomographic tilt series of a dividing cell [65 tilt series in Other format] | Otsuka S [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
237.8 GB | — |
| 2020-07-24 |  |
Human delta protocadherin 10 full ectodomains on membranes, tomogram 3 [1 tilt series in MRC format] | Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna R, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 32101743] [DOI: 10.1016/j.celrep.2020.02.003] |
55.1 GB | — |
| 2024-05-14 |  |
Cryo-electron tomography of keyhole limpet hemocyanin [41 multi-frame micrographs composed of 168 frames each in EER format] | Comet M, Dijkman PM, Boer Iwema R, Franke T, Masiulis S, Schampers R, Raschdorf O, Grollios F, Pryor Jr. EE, Drulyte I [Pubmed: 38512070] [DOI: 10.1107/S2059798324001840] |
3.6 GB | — |
| 2024-09-26 |  |
SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 3) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
39.2 GB | — |
| 2022-01-12 |  |
In vivo architecture of the polar organizing protein Z (PopZ) meshwork in the Alphaproteobacteria Magnetospirillum gryphiswaldense and Caulobacter crescentus [multiple data sets in MRC format] | Toro-Nahuelpan M, Plitzko JM, Schüler D, Pfeiffer D [Pubmed: 34971672] [DOI: 10.1016/j.jmb.2021.167423] |
6.4 GB | — |
| 2023-07-18 |  |
Targeted volume Correlative Light and Electron Microscopy of environmental marine microorganisms [1937 micrographs in TIFF format] | Mocaer K, Mizzon G, Gunkel M, Halavatyi A, Steyer AM, Oorschot V, Schorb M, Le Kieffre C, Yee DP, Chevalier F, Gallet B, Decelle J, Schwab Y, Ronchi P [DOI: 10.1101/2023.01.27.525698] |
14.5 GB | — |
| 2026-02-24 |  |
Volume electron microscopy reveals heterogeneity of the hemostatic response in veins and arteries [multiple data sets in TIFF format] | Tomaiuolo T, Christensen TA, Stalker TJ | 169.2 GB | — |
| 2021-11-08 |  |
The frame-aligned tilt series of of FIB-milled HEK293 cells treated with Taxol [40 tilt series in MRC format] | Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E [Pubmed: 32783917] [DOI: 10.1016/j.cell.2020.08.004] |
2.1 GB | — |
| 2021-11-08 |  |
Frame aligned tilt series of cryo-FIB milled HEK293 cells expressing pathogenic LRRK2(I2020T)mutant [39 tilt series in MRC format] | Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E [Pubmed: 32783917] [DOI: 10.1016/j.cell.2020.08.004] |
2.1 GB | — |
