Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2018-10-25 | CryoET of bacterial RNA polymerase with several detergents [multiple data sets in MRC and Other formats] | Chen J, Noble AJ, Kang JY, Darst SA [DOI: 10.1016/j.yjsbx.2019.100005] |
207.5 GB | — | |
| 2019-04-05 | mouse MDA5-dsRNA Filaments in presence of 1mM AMPPNP [multiple data sets in MRC format] | Yu Q, Qu K, Modis YE [Pubmed: 30449722] [DOI: 10.1016/j.molcel.2018.10.012] |
0.0 B | 3.68 - 3.93 Å | |
| 2019-01-17 | CryoEM reconstruction of native lens connexin-46/50 at 3.4 angstrom resolution [multiple data sets in MRC format] | Myers JB, Reichow SL [Pubmed: 30542154] [DOI: 10.1038/s41586-018-0786-7] |
774.5 GB | 3.4 Å | |
| 2021-04-14 | mouse MDA5-dsRNA filamemts in complex of 2mM ADP-AlF4 [multiple data sets in MRC format] | Yu Q, Qu K, Modis YE [Pubmed: 30449722] [DOI: 10.1016/j.molcel.2018.10.012] |
195.3 GB | 4.06 Å | |
| 2019-04-05 | mouse MDA5-dsRNA filaments [592 multi-frame micrographs composed of 27 frames each in MRC format] | Yu Q, Qu K, Modis YE [Pubmed: 30449722] [DOI: 10.1016/j.molcel.2018.10.012] |
499.5 GB | 4.02 - 4.16 Å | |
| 2019-04-05 | mouse MDA5-dsRNA 2.5-mM AMPPNP Filamemt [471 multi-frame micrographs composed of 75 frames each in MRC format] | Yu Q, Qu K, Modis YE [Pubmed: 30449722] [DOI: 10.1016/j.molcel.2018.10.012] |
1.1 TB | 4.06 Å | |
| 2019-04-05 | mouse MDA5-dsRNA 10mM ATP Filamemt [2213 micrographs in MRC format] | Yu Q, Qu K, Modis YE [Pubmed: 30449722] [DOI: 10.1016/j.molcel.2018.10.012] |
138.9 GB | 3.87 Å | |
| 2018-12-13 | Beta-2-microglobulin fibrils with multiple polymorphs formed at pH 2 [5549 micrographs in MRC format] | Iadanza MG [Pubmed: 30375379] [DOI: 10.1038/s41467-018-06761-6] |
294.3 GB | 3.975 Å | |
| 2018-09-10 | Cryo electron microscopy micrographs of yeast Exocyst complex [6472 multi-frame micrographs composed of 32 frames each in MRCS format] | Wang HW, Guo W, Li Y, Mei KR [Pubmed: 29335562] [DOI: 10.1038/s41594-017-0016-2] |
10.0 TB | 4.4 Å | |
| 2018-08-16 | Combining high-resolution cryo-electron microscopy and mutagenesis to develop cowpea mosaic virus for bionanotechnology [5619 multi-frame micrographs composed of 1 frames each in MRC format] | Thompson RF, Iadanza MG, Hesketh EL, Rawson S, Ranson NA, Meshcheriakova Y, Durrant A, Lomonossoff GP [Pubmed: 30487656] [DOI: 10.1038/s41596-018-0084-8] |
351.5 GB | 2.7 Å | |
| 2018-08-15 | The first reconstruction of beta-galactosidase solved by cryoARM200 [1338 multi-frame micrographs composed of 49 frames each in TIFF format] | Kato T, Terehara N, Namba K | 321.4 GB | 2.6 Å | |
| 2018-10-25 | Structure of the Macrobrachium rosenbergii Nodavirus: A new genus within the Nodaviridae? [2459 micrographs in MRC format] | Ho KL, Gabrielsen M, Beh PL, Kueh CL, Thong QX, Streetley J, Tan WS, Bhella D [Pubmed: 30346944] [DOI: 10.1371/journal.pbio.3000038] |
130.4 GB | 3.28 Å | |
| 2018-08-08 | Sub-2 Å Single-Particle Cryo-EM Reconstruction of AAV2-L336C [multiple data sets in MRC and MRCS formats] | Tan YZ, Aiyer S, Mietzsch M, Hull JA, McKenna R, Grieger J, Samulski RJ, Baker TS, Agbandje-McKenna M, Lyumkis D [Pubmed: 30194371] [DOI: 10.1038/s41467-018-06076-6] |
5.7 TB | 1.86 Å | |
| 2018-08-09 | Three-dimensional nanostructure of an intact microglia cell [multiple data sets in TIFF and Other formats] | Bolasco G, Weinhard L, Boissonnet T, Neujahr R, Gross CT [DOI: 10.3389/fnana.2018.00105] |
7.4 GB | — | |
| 2018-07-27 | Human apo-ferritin reconstructed in RELION-3.0 [1255 multi-frame micrographs composed of 40 frames each in TIFF format] | Zivanov J, Nakane T, Hagen WJH, Scheres SHW [Pubmed: 30412051] [DOI: 10.7554/eLife.42166] |
191.5 GB | 1.65 Å | |
| 2019-08-07 | Identification of a druggable VP1-VP3 interprotomer pocket in the capsid of enteroviruses [2120 micrographs in MRC format] | Geraets JA, Flatt JW, Domanska A, Butcher SJ [Pubmed: 31185007] [DOI: 10.1371/journal.pbio.3000281] |
2.2 TB | 4.0 Å | |
| 2018-10-05 | Paired C2S2M PSII-LHCII supercomplexes from thylakoid membranes of Pisum sativum [6929 micrographs in MRC format] | Melero R [Pubmed: 28855679] [DOI: 10.1038/s41598-017-10700-8] |
433.1 GB | 14.0 Å | |
| 2018-07-06 | Single particle cryoEM of hemagglutinin with spot-to-plunge time of 500ms [multiple data sets in MRC format] | Noble AJ, Wei H, Dandey VP, Zhang Z, Potter CS, Carragher B [Pubmed: 30250056] [DOI: 10.1038/s41592-018-0139-3] |
51.1 GB | — | |
| 2018-08-23 | CryoEM structure of human LRRC8A [5805 multi-frame micrographs composed of 40 frames each in TIFF format] | Kasuya G, Nakane T, Yokoyama T, Shirouzu M, Ishitani R, Nureki O [Pubmed: 30127360] [DOI: 10.1038/s41594-018-0109-6] |
2.9 TB | 4.25 Å | |
| 2018-07-05 | Cryo-EM structure of alpha-synuclein fibrils [118 multi-frame micrographs composed of 50 frames each in MRC format] | Guerrero-Ferreira R, Taylor NM, Mona D, Ringler P, Lauer ME, Riek R, Britschgi M, Stahlberg H [Pubmed: 29969391] [DOI: 10.7554/elife.36402] |
6.3 GB | — | |
| 2018-06-20 | An atomic structure of human gamma-secretase [2925 multi-frame micrographs composed of 20 frames each in MRCS format] | Bai XC, Yan C, Yang G, Lu P, Ma D, Sun L, Zhou R, Scheres SHW, Shi Y [Pubmed: 26280335] [DOI: 10.1038/NATURE14892] |
11.7 TB | 3.4 Å | |
| 2019-01-18 | Calicivirus VP2 forms a portal to mediate endosome escape [13872 micrographs in MRC format] | Conley MJ, McElwee M, Azmi LB, Gabrielsen M, Byron O, Goodfellow IG, Bhella D [Pubmed: 30626974] [DOI: 10.1038/s41586-018-0852-1] |
867.0 GB | 3.75 Å | |
| 2019-01-18 | Calicivirus VP2 forms a portal to mediate endosome escape [5198 micrographs in MRC format] | Conley MJ, McElwee M, Azmi LB, Gabrielsen M, Byron O, Goodfellow IG, Bhella D [Pubmed: 30626974] [DOI: 10.1038/s41586-018-0852-1] |
324.9 GB | 3.0 Å | |
| 2018-06-11 | RNA Polymerase III initially transcribing complex [multiple data sets in TIFF and MRC formats] | Vorländer MK, Khatter H, Wetzel R, Hagen WJH, Müller CW [Pubmed: 29345638] [DOI: 10.1038/nature25440] |
1.6 TB | 4.3 Å | |
| 2018-07-06 | Structure of the herpes-simplex virus portal-vertex [3818 micrographs in MRC format] | McElwee M, Vijayakrishnan S, Rixon FJ, Bhella D [Pubmed: 29924793] [DOI: 10.1371/journal.pbio.2006191] |
238.6 GB | 7.7 Å |