Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-03 | Human VDAC1 in cMSP1delH5 circularized nanodiscs. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
4.4 TB | 5.73 Å | |
| 2025-12-19 | Human Connexin 26 dodecamer at 90mmHg PCO2, pH7.4 [multiple data sets in TIFF, MRC and MRCS formats] | Brotherton DH, Savva CG, Ragan TJ, Dale N, Cameron AD [Pubmed: 35276081] [DOI: 10.1016/j.str.2022.02.010] |
5.4 TB | 1.9 Å | |
| 2020-05-27 | 2.7 Angstrom cryo-EM reconstructions of glucose isomerase in the presence of substantial aberrations [202 multi-frame micrographs composed of 200 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.0 TB | 2.7 Å | |
| 2020-05-27 | 2.6 Angstrom cryo-EM reconstructions of HemQ from Geobacillus in the presence of substantial aberrations [257 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.3 TB | 2.6 Å | |
| 2020-05-26 | 2.3 Angstrom cryo-EM reconstructions of HemQ from Geobacillus [258 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.4 TB | 2.32 Å | |
| 2025-09-04 | Particle stacks from ANP amyloids from left atrial appendage of atrial fibrillation patient [multiple data sets in MRCS format] | Broggini L, Chaves-Sanjuan A, Ricagno S | 492.9 GB | 2.96 - 3.3 Å | |
| 2026-06-24 | Structure of the ribosome with elongation factor G trapped in the pretranslocation state [stack of 1341961 particles in MRC format] | Brilot AF, Korostelev AA, Ermolenko DN, Grigorieff N [Pubmed: 24324137] [DOI: 10.1073/pnas.1311423110] |
512.1 GB | 5.9 - 7.6 Å | |
| 2023-02-28 | Single particle cryo-EM dataset of mitochondrial respiratory complex I from Bos taurus in DDM [2370 multi-frame micrographs composed of 24 frames each in MRC format] | Bridges HR, Blaza JN, Yin Z, Chung I, Pollak MN, Hirst J [Pubmed: 36701435] [DOI: 10.1126/science.ade3332] |
352.7 GB | 2.8 - 3.5 Å | |
| 2023-02-28 | Single particle cryo-EM dataset of mitochondrial respiratory complex I from Bos taurus in DDM in the presence of IM1761092 [17203 multi-frame micrographs composed of 40 frames each in TIFF format] | Bridges HR, Blaza JN, Yin Z, Chung I, Pollak MN, Hirst J [Pubmed: 36701435] [DOI: 10.1126/science.ade3332] EMD-14251 EMD-14252 EMD-14253 EMD-14254 EMD-14255 EMD-14256 EMD-14257 EMD-14258 EMD-14259 EMD-14260 EMD-14261 EMD-14262 EMD-14263 EMD-14264 EMD-14265 EMD-14266 EMD-14267 EMD-14268 EMD-14269 EMD-14270 EMD-14272 EMD-14273 EMD-14274 EMD-14275 EMD-14276 EMD-14277 EMD-14278 EMD-14279 EMD-14280 EMD-14281 EMD-14282 EMD-14283 EMD-14284 EMD-14285 EMD-14286 EMD-14287 EMD-14288 EMD-14289 EMD-14290 EMD-14291 EMD-14292 EMD-14293 EMD-14294 EMD-14295 EMD-14296 EMD-14297 EMD-14298 EMD-14299 EMD-14300 EMD-14301 EMD-14302 EMD-14303 EMD-14304 EMD-14305 EMD-14306 EMD-14307 EMD-14308 EMD-14309 EMD-14310 EMD-14311 |
6.5 TB | 2.17 - 2.68 Å | |
| 2025-07-25 | Cryo-EM of RNAP post-terminal complexes on negatively supercoiled DNA [multiple data sets in TIFF format] | Brewer JJ, Inlow K, Mooney RA, Bosch B, Olinares PDB, Marcelino LP, Chait BT, Landick R, Gelles J, Campbell EA, Darst SA [Pubmed: 39779919] [DOI: 10.1038/s41594-024-01447-8] |
1.3 TB | 4.69 Å | |
| 2025-04-09 | Cryo-EM of RNAP post-terminal complexes bound to RapA+ADP+AlF3 on negatively supercoiled DNA [multiple data sets in TIFF format] | Brewer JJ, Inlow K, Mooney RA, Bosch B, Olinares PDB, Marcelino LP, Chait BT, Landick R, Gelles J, Campbell EA, Darst SA [Pubmed: 39779919] [DOI: 10.1038/s41594-024-01447-8] |
1.7 TB | 3.62 Å | |
| 2025-10-28 | Structural Insights into De Novo Promoter Escape by Mycobacterium tuberculosis RNA Polymerase [10979 multi-frame micrographs composed of 50 frames each in TIFF format] | Brewer JJ, Campbell EA, Darst SA, Delbeau M, Bates Zoullas W | 3.0 TB | — | |
| 2026-02-16 | Structural basis for loading of Transcription Repair-Coupling factor Mfd onto stalled elongation complexes [7811 multi-frame micrographs composed of 50 frames each in TIFF format] | Brewer J, Campbell EA, Darst SA [Pubmed: 40949946] [DOI: 10.1101/2025.09.05.674597] |
1.8 TB | 3.48 - 4.29 Å | |
| 2026-03-30 | Aligned, dose-weighted electron micrographs of His-tagged Exo84 and Sro7 on NI-NTA lipid monolayer grids [4970 micrographs in MRC format] | Brennwald P, Strauss JD, Baker RW [Pubmed: 41083086] [DOI: 10.1016/j.jsb.2025.108253] |
436.4 GB | 3.1 Å | |
| 2019-04-18 | Single particle cryoEM of mouse protocadherin gamma B6 [multiple data sets in MRC format] | Brasch J, Goodman KM, Potter CS, Carragher B, Honig B, Shapiro L, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
438.8 GB | 35.0 Å | |
| 2019-04-18 | Single particle cryo electron tomography of mouse protocadherin gamma B6 [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
384.1 GB | 35.0 Å | |
| 2019-04-18 | CryoET of mouse protocadherin gamma B6 on membranes (without energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
363.4 GB | — | |
| 2019-04-18 | CryoET of mouse protocadherin gamma B6 on membranes (with energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Carragher B [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
411.3 GB | — | |
| 2019-04-18 | CryoET of cis-mutated mouse protocadherin gamma B6 on membranes [multiple data sets in MRC format] | Brasch J, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
379.7 GB | — | |
| 2024-07-04 | Tomograms and the raw 2d tilt series of ER-ER junctions of HeLa cells in interphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
304.4 GB | — | |
| 2024-07-04 | Tomograms and the raw 2d tilt series of ER-ER/nuclear envelope junctions of HeLa cells in late anaphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
305.3 GB | — | |
| 2024-07-04 | Tomograms and the raw 2d tilt series of ER-nuclear envelope junctions of HeLa cells in interphase [multiple data sets in TIFF and MRC formats] | Bragulat-Teixidor H, Otsuka S [Pubmed: 38877171] [DOI: 10.1038/s44319-024-00175-w] |
434.0 GB | — | |
| 2020-10-28 | The α-synuclein hereditary mutation E46K unlocks a more stable, pathogenic fibril structure [4919 multi-frame micrographs composed of 30 frames each in TIFF format] | Boyer DR, Li B, Sun C, Fan W, Zhou K, Hughes MP, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 32015135] [DOI: 10.1073/pnas.1917914117] |
897.9 GB | 2.5 Å | |
| 2021-03-03 | Cryo electron microscopy of alpha-synuclein H50Q fibrils [3577 multi-frame micrographs composed of 30 frames each in MRC format] | Boyer DR, Li B, Sun C, Fan W, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 31695184] [DOI: 10.1038/s41594-019-0322-y] |
595.3 GB | 3.3 Å | |
| 2022-05-26 | Cryo TEM single particle dataset of purified ChAdOx1/ADZ-1222 [2875 multi-frame micrographs composed of 40 frames each in TIFF format] | Boyd RJ, Baker AB [Pubmed: 34851659] [DOI: 10.1126/sciadv.abl8213] |
1.0 TB | 3.07 Å |