Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-10-03 |  |
Cryo electron tomography of Cytochalasin D-induced protrusions of Drosophila S2 cells treated with thapsigargin or MG132 [multiple data sets in TIFF and MRC formats] | Ventura Santos C, Carter AP [Pubmed: 37702953] [DOI: 10.15252/embr.202357264] |
107.6 GB | — |
| 2025-09-15 |  |
Serial Block Face - Scanning Electron Microscopy of brain microvessels with/without P. falciparum egress products [multiple data sets in TIFF format] | Long RKML, Ronchi PR, Bernabeu MB [DOI: 10.1101/2024.03.29.587334] |
2.3 GB | — |
| 2018-01-17 |  |
Serial Block Face Scanning Electron Micrscopy dataset of the optic lobe from an adult locust [100 micrographs in TIFF format] | Cocks ET [DOI: 10.1111/jmi.12676] |
3.4 GB | — |
| 2025-08-01 |  |
Dataset 3: 70S ribosome with 3 GE81112 bound (Complex 5) [19615 multi-frame micrographs composed of 40 frames each in TIFF format] | Schedlbauer A, Han X, van Bakel W, Kaminishi T, Ochoa-Lizarralde B, Iturrioz I, Çapuni R, Parry R, Zegarra R, Gil-Carton D, López-Alonso JP, Sanz KB, Brandi L, Gualerzi CO, Fucini P, Connell SR [DOI: 10.1101/2024.09.26.614503] |
3.7 TB | — |
| 2026-04-27 |  |
Time-resolved cryo-EM dataset of insulin degrading enzyme in the presence of a 5x molar excess of insulin with a 123 ms freeze time [10932 multi-frame micrographs composed of 50 frames each in TIFF format] | Tang WJ, Mancl JM [DOI: 10.7554/eLife.105761.1] |
5.3 TB | — |
| 2022-03-04 |  |
Cryo-electron tomographs of mouse thalamus neurons [60 reconstructed volumes in MRC format] | Nedozralova H, Basnet N, Ibiricu I, Bodakuntla S, Biertümpfel C, Mizuno N [Pubmed: 35262630] [DOI: 10.1083/jcb.202106086] |
71.1 GB | — |
| 2025-08-01 |  |
Dataset 2: Complex 2,3 and 4: 30S ribosome with IF1/2/3, tRNA, and GE81112 in complex preparation reaction [6172 multi-frame micrographs composed of 19 frames each in MRC format] | Schedlbauer A, Han X, van Bakel W, Kaminishi T, Ochoa-Lizarralde B, Iturrioz I, Çapuni R, Parry R, Zegarra R, Gil-Carton D, López-Alonso JP, Sanz KB, Brandi L, Gualerzi CO, Fucini P, Connell SR [DOI: 10.1101/2024.09.26.614503] |
2.3 TB | — |
| 2022-03-04 |  |
Cryo-electron tomographs of mouse hippocampal neurons [63 reconstructed volumes in MRC format] | Nedozralova H, Basnet N, Ibiricu I, Bodakuntla S, Biertümpfel C, Mizuno N [Pubmed: 35262630] [DOI: 10.1083/jcb.202106086] |
88.6 GB | — |
| 2024-12-03 |  |
Raw LZW-compressed TIFF files (Structural dynamics of human ribosomes in situ reconstructed by exhaustive high-resolution template matching) [multiple data sets in DM4 and TIFF formats] | Rickgauer JP, Lippincott-Schwartz J [DOI: 10.1016/j.molcel.2024.11.003] |
416.0 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
2.3 GB | — |
| 2024-06-18 |  |
Cryo-electron tomography of Enterococcus faecium [39 tilt series in MRC format] | Park D, Hang HC [Pubmed: 38857064] [DOI: 10.7554/eLife.95297] |
432.1 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
2.3 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2023-10-03 |  |
Adaptive traits of cysts of the snow alga Sanguina nivaloides unveiled by 3D subcellular imaging [multiple data sets in TIFF format] | Ezzedine J, Uwizeye C, Si Larbi G, Villain G, Louwagie M, Schilling M, Hagenmuller P, Gallet B, Stewart A, Petroutsos D, Devime F, Salze P, Liger L, Jouhet J, Dumont M, Ravanel S, Amato A, Valay JG, Jouneau PH, Falconet D, Marechal E [DOI: 10.21203/rs.3.rs-3038444/v1] |
104.7 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
2.3 GB | — |
| 2023-10-09 |  |
Quantitative subcellular reconstruction reveals a lipid mediated inter-organelle biogenesis network [multiple data sets in TIFF format] | Lee RG, Rudler DL, Raven SA, Peng L, Chopin A, Moh ESX, McCubbin T, Siira SJ, Fagan SV, DeBono NJ, Stentenbach M, Browne J, Rackham FF, Li J, Simpson KJ, Marcellin E, Packer NH, Reid GE, Padman BS, Rackham O, Filipovska A | 434.2 GB | — |
| 2025-09-16 |  |
Rapid Hepatitis C Virus Replication Machinery Removal After Antiviral 1 Treatment with DAA Monitored By Multimodal Imaging [300 reconstructed volumes in TIFF format] | Castro V, Calvo G, Perez-Berna AJ, Mamprin K, Kapishnikov S, Rogers D, O'Connor S, Sheridan P, Fahy K, Pereiro E, Gastaminza P [Pubmed: 40553718] [DOI: 10.1016/j.str.2025.05.015] |
3.4 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2021-04-14 |  |
Cytoklepty in the plankton: a host strategy to optimize the bioenergetic machinery of endosymbiotic algae [500 multi-frame micrographs composed of 1 frames each in TIFF format] | Uwizeye C, Mars Brisbin M, Gallet B, LeKieffre C, Schieber NL, Wangpraseurt D, Decelle J [Pubmed: bioRxiv] [DOI: 10.1101/2020.12.08.416644] |
2.9 GB | — |
| 2026-02-26 |  |
Heterogeneous Assembly of Herpesvirus Capsids In Situ Illuminated by Cryo-FIB/ET. [multiple data sets in MRC and TIFF formats] | Oliver SL | 3.3 TB | — |
| 2026-02-13 |  |
Unaligned Movies of E. coli grown at 37°C clarified cell lysate [9748 multi-frame micrographs composed of 45 frames each in TIFF format] | May MB [Pubmed: 40894545] [DOI: 10.1101/2025.08.21.669550] |
2.4 TB | — |
| 2018-05-02 |  |
Correlative microscopy of vitreous sections provides insights into BAR-domain organisation in situ [9 tilt series in MRC format] | Bharat TAM, Hoffmann PC, Kukulski W [Pubmed: 29681471] [DOI: 10.1016/j.str.2018.03.015] |
27.9 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2022-01-28 |  |
CryoET of presequence protease single particle [multiple data sets in TIFF and MRC formats] | Liang WG, Wijaya J, Wei H, Noble AJ, Mancl JM, Mo S, Lee D, Lin King JV, Pan M, Liu C, Koehler CM, Zhao M, Potter CS, Carragher B, Li S, Tang WJ [Pubmed: 35383169] [DOI: 10.1038/s41467-022-29322-4] |
25.4 GB | — |
| 2024-08-23 |  |
Exploring the 3D structure of chromosomes in mitotic cells [multiple data sets in TIFF and DM4 formats] | Cisneros- Soberanis F, Beckett AJ, Simpson E, Pucekova N, Prior IA, Booth DG, Earnshaw WC [Pubmed: 39186086] [DOI: 10.1083/jcb.202403165] |
31.6 GB | — |
